Mercurial > repos > dfornika > data_manager_build_bracken_database

diff data_manager_conf.xml @ 0:a391d55f928a draft

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planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_bracken_database/ commit 423cf96266f6ac433052ff72edb1397502313010-dirty
author dfornika
date Fri, 26 Jul 2019 16:00:08 -0400
parents
children 5a1116c3e2c8
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/data_manager_conf.xml	Fri Jul 26 16:00:08 2019 -0400
@@ -0,0 +1,18 @@
+<data_managers>
+    <data_manager tool_file="data_manager/mash_build_sketch.xml" id="mash_build_sketch" version="2.1+galaxy0">
+        <data_table name="mash_sketches">
+            <output>
+                <column name="value"/>
+                <column name="name"/>
+                <column name="path" output_ref="out_file">
+                    <move type="file">
+                        <source>#import os#${os.path.dirname($path)}</source>
+                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">mash_sketches/#import os#${os.path.dirname($path)}</target>
+                   </move>
+                      <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/mash_sketches/${path}</value_translation>
+                      <value_translation type="function">abspath</value_translation>
+                </column>
+            </output>
+        </data_table>
+    </data_manager>
+</data_managers>