view tool_dependencies.xml @ 0:1a16713762e1 draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_picard_1_126_0 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
author devteam
date Mon, 09 Nov 2015 11:08:50 -0500
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<?xml version="1.0"?>
<tool_dependency>
    <package name="picard" version="1.126.0">
        <install version="1.0">
            <actions_group>
                <actions>
                    <action type="download_by_url">https://github.com/broadinstitute/picard/releases/download/1.126/picard-tools-1.126.zip</action>
                    <action type="move_directory_files">
                        <source_directory>.</source_directory>
                        <destination_directory>$INSTALL_DIR</destination_directory>
                    </action>       
                </actions>                
                <action type="set_environment">
                    <environment_variable name="JAVA_JAR_PATH" action="set_to">$INSTALL_DIR</environment_variable>
                </action>
            </actions_group>
        </install>
        <readme>
This picard package dependency is retrieved directly from https://github.com/broadinstitute/picard/releases
        </readme>
    </package>
</tool_dependency>