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planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_picard_1_126_0 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
author devteam
date Mon, 09 Nov 2015 11:08:50 -0500
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1a16713762e1 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_picard_1_126_0 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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1 <?xml version="1.0"?>
1a16713762e1 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_picard_1_126_0 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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2 <tool_dependency>
1a16713762e1 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_picard_1_126_0 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
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3 <package name="picard" version="1.126.0">
1a16713762e1 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_picard_1_126_0 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
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4 <install version="1.0">
1a16713762e1 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_picard_1_126_0 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
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5 <actions_group>
1a16713762e1 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_picard_1_126_0 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
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6 <actions>
1a16713762e1 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_picard_1_126_0 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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7 <action type="download_by_url">https://github.com/broadinstitute/picard/releases/download/1.126/picard-tools-1.126.zip</action>
1a16713762e1 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_picard_1_126_0 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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8 <action type="move_directory_files">
1a16713762e1 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_picard_1_126_0 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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9 <source_directory>.</source_directory>
1a16713762e1 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_picard_1_126_0 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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10 <destination_directory>$INSTALL_DIR</destination_directory>
1a16713762e1 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_picard_1_126_0 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
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11 </action>
1a16713762e1 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_picard_1_126_0 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
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12 </actions>
1a16713762e1 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_picard_1_126_0 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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13 <action type="set_environment">
1a16713762e1 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_picard_1_126_0 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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14 <environment_variable name="JAVA_JAR_PATH" action="set_to">$INSTALL_DIR</environment_variable>
1a16713762e1 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_picard_1_126_0 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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15 </action>
1a16713762e1 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_picard_1_126_0 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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16 </actions_group>
1a16713762e1 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_picard_1_126_0 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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17 </install>
1a16713762e1 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_picard_1_126_0 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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18 <readme>
1a16713762e1 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_picard_1_126_0 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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19 This picard package dependency is retrieved directly from https://github.com/broadinstitute/picard/releases
1a16713762e1 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_picard_1_126_0 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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20 </readme>
1a16713762e1 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_picard_1_126_0 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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21 </package>
1a16713762e1 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_picard_1_126_0 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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22 </tool_dependency>