Mercurial > repos > devteam > fastqc
annotate test-data/fastqc_data.txt @ 13:7d8c56e1a3aa draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 35d722c0cafe2a2f2e4e2f73c265ae56ae237997
| author | iuc |
|---|---|
| date | Fri, 24 Nov 2017 08:18:18 -0500 |
| parents | e8c90ad3cbf9 |
| children | da652f6f84cc |
| rev | line source |
|---|---|
|
13
7d8c56e1a3aa
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 35d722c0cafe2a2f2e4e2f73c265ae56ae237997
iuc
parents:
6
diff
changeset
|
1 ##FastQC 0.11.5 |
| 1 | 2 >>Basic Statistics pass |
| 3 #Measure Value | |
|
13
7d8c56e1a3aa
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 35d722c0cafe2a2f2e4e2f73c265ae56ae237997
iuc
parents:
6
diff
changeset
|
4 Filename 1000gsample_fastq_bz2_dat.bz2 |
| 1 | 5 File type Conventional base calls |
| 6 Encoding Sanger / Illumina 1.9 | |
| 7 Total Sequences 5000 | |
| 8 Sequences flagged as poor quality 0 | |
| 9 Sequence length 54 | |
| 10 %GC 43 | |
| 11 >>END_MODULE | |
| 12 >>Per base sequence quality warn | |
| 13 #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile | |
| 14 1 28.9946 31.0 27.0 33.0 22.0 34.0 | |
| 15 2 28.486 30.0 26.0 32.0 21.0 33.0 | |
| 16 3 28.5272 30.0 26.0 32.0 21.0 34.0 | |
| 17 4 28.6252 30.0 26.0 32.0 22.0 33.0 | |
| 18 5 28.4804 30.0 26.0 32.0 21.0 33.0 | |
| 19 6 28.5128 30.0 26.0 32.0 22.0 33.0 | |
| 20 7 28.4102 30.0 26.0 32.0 21.0 33.0 | |
| 21 8 28.4674 30.0 26.0 32.0 22.0 33.0 | |
| 22 9 28.182 30.0 26.0 32.0 21.0 33.0 | |
| 23 10 28.0908 30.0 26.0 32.0 21.0 33.0 | |
| 24 11 28.1876 30.0 26.0 32.0 21.0 33.0 | |
| 25 12 28.1742 30.0 26.0 32.0 21.0 33.0 | |
| 26 13 27.923 30.0 25.0 32.0 20.0 33.0 | |
| 27 14 27.8984 29.0 25.0 32.0 21.0 33.0 | |
| 28 15 27.6112 29.0 25.0 32.0 20.0 33.0 | |
| 29 16 27.6638 29.0 25.0 32.0 20.0 33.0 | |
| 30 17 27.5734 29.0 25.0 32.0 20.0 33.0 | |
| 31 18 27.6348 29.0 25.0 32.0 20.0 33.0 | |
| 32 19 27.6526 29.0 25.0 32.0 20.0 33.0 | |
| 33 20 27.2716 29.0 24.0 32.0 19.0 33.0 | |
| 34 21 27.2642 29.0 25.0 31.0 19.0 33.0 | |
| 35 22 26.881 28.0 24.0 31.0 19.0 33.0 | |
| 36 23 26.8124 28.0 24.0 31.0 19.0 33.0 | |
| 37 24 26.8204 28.0 24.0 31.0 19.0 33.0 | |
| 38 25 26.6606 28.0 24.0 31.0 18.0 33.0 | |
| 39 26 26.3806 28.0 23.0 31.0 18.0 33.0 | |
| 40 27 25.947 28.0 23.0 31.0 17.0 33.0 | |
| 41 28 25.7446 27.0 22.0 31.0 16.0 33.0 | |
| 42 29 25.6856 27.0 22.0 31.0 16.0 33.0 | |
| 43 30 25.5228 27.0 22.0 31.0 16.0 33.0 | |
| 44 31 25.354 27.0 22.0 30.0 16.0 32.0 | |
| 45 32 25.1656 27.0 22.0 30.0 16.0 32.0 | |
| 46 33 25.0164 26.0 21.0 30.0 15.0 32.0 | |
| 47 34 24.75 26.0 21.0 30.0 15.0 32.0 | |
| 48 35 24.3926 26.0 21.0 30.0 15.0 32.0 | |
| 49 36 24.1122 25.0 20.0 30.0 14.0 32.0 | |
| 50 37 23.8612 25.0 20.0 29.0 13.0 32.0 | |
| 51 38 23.7544 25.0 20.0 29.0 13.0 32.0 | |
| 52 39 23.485 25.0 19.0 29.0 13.0 32.0 | |
| 53 40 23.1984 24.0 19.0 29.0 13.0 32.0 | |
| 54 41 23.0976 24.0 19.0 29.0 13.0 32.0 | |
| 55 42 22.9212 24.0 19.0 28.0 13.0 31.0 | |
| 56 43 22.5172 24.0 18.0 28.0 12.0 31.0 | |
| 57 44 22.3234 23.0 18.0 28.0 12.0 31.0 | |
| 58 45 22.1372 23.0 18.0 28.0 11.0 31.0 | |
| 59 46 22.2166 23.0 18.0 28.0 11.0 31.0 | |
| 60 47 22.075 23.0 18.0 28.0 11.0 31.0 | |
| 61 48 21.4592 22.0 17.0 27.0 11.0 31.0 | |
| 62 49 21.0954 22.0 16.0 27.0 10.0 30.0 | |
| 63 50 20.9356 22.0 16.0 27.0 10.0 30.0 | |
| 64 51 20.6152 21.0 15.0 27.0 9.0 30.0 | |
| 65 52 20.6588 21.0 16.0 27.0 9.0 30.0 | |
| 66 53 19.5852 20.0 14.0 25.0 9.0 29.0 | |
| 67 54 19.9424 21.0 14.0 26.0 7.0 30.0 | |
| 68 >>END_MODULE | |
| 69 >>Per tile sequence quality pass | |
| 70 #Tile Base Mean | |
| 71 1 1 0.4542485249902164 | |
| 72 1 2 0.02493171505959424 | |
| 73 1 3 0.004493134032774293 | |
| 74 1 4 0.6119404948560927 | |
| 75 1 5 0.5283275008594686 | |
| 76 1 6 0.3741933003058371 | |
| 77 1 7 -0.2985554485298749 | |
| 78 1 8 0.6040181642739206 | |
| 79 1 9 0.43795745033596845 | |
| 80 1 10 0.05327706110314523 | |
| 81 1 11 0.8097461135057031 | |
| 82 1 12 0.9171964750225641 | |
| 83 1 13 1.0716973449965757 | |
| 84 1 14 0.562649938864773 | |
| 85 1 15 0.5112535943737946 | |
| 86 1 16 0.7098461441939676 | |
| 87 1 17 0.3989886413671577 | |
| 88 1 18 0.2351551176870892 | |
| 89 1 19 0.002716666680861124 | |
| 90 1 20 -0.5270840838615776 | |
| 91 1 21 0.08959510509382795 | |
| 92 1 22 -0.6322238602545553 | |
| 93 1 23 -0.8566085860715056 | |
| 94 1 24 -0.8167218970288026 | |
| 95 1 25 0.7728199138173544 | |
| 96 1 26 -0.26898877195552373 | |
| 97 1 27 -0.7734079986509634 | |
| 98 1 28 0.46313879073469266 | |
| 99 1 29 -1.0803714983510417 | |
| 100 1 30 -0.9107347156963463 | |
| 101 1 31 -1.1279249650605188 | |
| 102 1 32 0.03588141895047414 | |
| 103 1 33 -0.3276409211703317 | |
| 104 1 34 0.07833890179158587 | |
| 105 1 35 -0.8393131051954583 | |
| 106 1 36 -1.024889600311596 | |
| 107 1 37 -1.4177418858492992 | |
| 108 1 38 -1.912918888443187 | |
| 109 1 39 -1.880569234686881 | |
| 110 1 40 -0.9901560786471286 | |
| 111 1 41 -1.9499635516515283 | |
| 112 1 42 -2.3754765893384793 | |
| 113 1 43 -1.6682056704307335 | |
| 114 1 44 -2.2432919652101226 | |
| 115 1 45 -2.1214550638335794 | |
| 116 1 46 -1.6941624871292404 | |
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| 132 2 8 0.09022085047660511 | |
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| 135 2 11 -1.2879339841743942 | |
| 136 2 12 -2.149225991399902 | |
| 137 2 13 -1.2225639492647176 | |
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| 142 2 18 -1.0554431729112004 | |
| 143 2 19 -1.374084310120118 | |
| 144 2 20 -0.25260300938050406 | |
| 145 2 21 -0.7384879229891972 | |
| 146 2 22 -0.5973032253339206 | |
| 147 2 23 -1.926205655668575 | |
| 148 2 24 -1.8018256821325878 | |
| 149 2 25 -1.2574609164634758 | |
| 150 2 26 -2.588402691369442 | |
| 151 2 27 -1.909427534670499 | |
| 152 2 28 -2.213051685455781 | |
| 153 2 29 -3.343130961110507 | |
| 154 2 30 -3.447731052692685 | |
| 155 2 31 -3.261502498638052 | |
| 156 2 32 -2.596108813039759 | |
| 157 2 33 -2.173306366835778 | |
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| 176 2 52 -3.3607789454081 | |
| 177 2 53 -4.239849482713934 | |
| 178 2 54 -3.3794861347802474 | |
| 179 3 1 0.4228103978999158 | |
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| 185 3 7 0.5808202482371243 | |
| 186 3 8 0.22341615758495692 | |
| 187 3 9 0.06605109582092084 | |
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| 427 7 33 -0.5225127160421259 | |
| 428 7 34 -1.217698394245712 | |
| 429 7 35 -0.43698210286445516 | |
| 430 7 36 -0.8617194371414314 | |
| 431 7 37 -0.8503759184833335 | |
| 432 7 38 -1.4196787952030938 | |
| 433 7 39 0.7301533760357302 | |
| 434 7 40 0.7585618700708174 | |
| 435 7 41 1.7479385462505697 | |
| 436 7 42 1.0389756251137356 | |
| 437 7 43 1.2716544694294072 | |
| 438 7 44 0.8462185243003688 | |
| 439 7 45 0.5023211599426425 | |
| 440 7 46 -1.2167732097399622 | |
| 441 7 47 0.9074901824518165 | |
| 442 7 48 1.1750918022017771 | |
| 443 7 49 0.56624181445153 | |
| 444 7 50 0.6698312855090336 | |
| 445 7 51 2.2300847717216037 | |
| 446 7 52 0.4429728583437047 | |
| 447 7 53 2.561016318151868 | |
| 448 7 54 1.5498067945126799 | |
| 449 8 1 -0.014529755552768364 | |
| 450 8 2 0.3398638417564257 | |
| 451 8 3 -0.884647137460437 | |
| 452 8 4 -0.06453009337920079 | |
| 453 8 5 -0.7006317751586337 | |
| 454 8 6 -0.567435658970183 | |
| 455 8 7 -0.3940305616520483 | |
| 456 8 8 -0.3584252746401084 | |
| 457 8 9 -0.09507422387217446 | |
| 458 8 10 -1.100569092743008 | |
| 459 8 11 -0.5250955154535717 | |
| 460 8 12 0.009504167330256053 | |
| 461 8 13 1.1938692906979327 | |
| 462 8 14 1.000658988638527 | |
| 463 8 15 0.6402128703918954 | |
| 464 8 16 1.2944615288093537 | |
| 465 8 17 -0.04942764822560264 | |
| 466 8 18 1.183118918592065 | |
| 467 8 19 0.842535671205745 | |
| 468 8 20 0.47382089351398804 | |
| 469 8 21 -0.23755421617313743 | |
| 470 8 22 -0.6145768014310278 | |
| 471 8 23 -0.7231244231755767 | |
| 472 8 24 -0.6094820780242785 | |
| 473 8 25 -0.5968633441011981 | |
| 474 8 26 0.4984320425241151 | |
| 475 8 27 0.27591326831736396 | |
| 476 8 28 -0.3545082680888356 | |
| 477 8 29 0.7847868726896827 | |
| 478 8 30 1.3575910761588545 | |
| 479 8 31 2.432708519102377 | |
| 480 8 32 0.17886784428984015 | |
| 481 8 33 1.3402323819970903 | |
| 482 8 34 0.3045832456829878 | |
| 483 8 35 -0.4031140101728319 | |
| 484 8 36 0.3619882277427031 | |
| 485 8 37 0.4401766661868969 | |
| 486 8 38 1.317397853638262 | |
| 487 8 39 0.5447701318289546 | |
| 488 8 40 -0.6924185220860437 | |
| 489 8 41 1.582163145181049 | |
| 490 8 42 1.4489577998017893 | |
| 491 8 43 0.8919753250443812 | |
| 492 8 44 1.0173415189527724 | |
| 493 8 45 1.1654227642207182 | |
| 494 8 46 1.5194121735042465 | |
| 495 8 47 2.5545490059812295 | |
| 496 8 48 1.6777655989932185 | |
| 497 8 49 0.3380778215816562 | |
| 498 8 50 1.5263375243682127 | |
| 499 8 51 -0.8929098806848152 | |
| 500 8 52 1.233525443013935 | |
| 501 8 53 0.5262569598630975 | |
| 502 8 54 2.859075956723018 | |
| 503 9 1 -1.2602813895396956 | |
| 504 9 2 -0.5699400798122021 | |
| 505 9 3 -0.4160196864800447 | |
| 506 9 4 -0.2769483940327966 | |
| 507 9 5 -1.8391938666619012 | |
| 508 9 6 0.16393689004942402 | |
| 509 9 7 0.004008654034226566 | |
| 510 9 8 -0.611366451110694 | |
| 511 9 9 -0.7996493872708683 | |
| 512 9 10 -0.9450135371874531 | |
| 513 9 11 1.1088914126510012 | |
| 514 9 12 1.7428375006635903 | |
| 515 9 13 0.1964836697829 | |
| 516 9 14 -1.0424782662634335 | |
| 517 9 15 0.3676638507840515 | |
| 518 9 16 -1.349982915635092 | |
| 519 9 17 0.45710829948681564 | |
| 520 9 18 -0.5443320618000911 | |
| 521 9 19 -0.16138589742170595 | |
| 522 9 20 0.4045398477623543 | |
| 523 9 21 -0.03690062140189809 | |
| 524 9 22 0.6566650286343325 | |
| 525 9 23 1.2801435506806307 | |
| 526 9 24 1.0140473337404288 | |
| 527 9 25 1.0155549565523962 | |
| 528 9 26 -0.4963391993059503 | |
| 529 9 27 -1.144348169591133 | |
| 530 9 28 -0.29241676482086376 | |
| 531 9 29 0.018773800794257056 | |
| 532 9 30 0.5935387885771561 | |
| 533 9 31 -0.04245487959043359 | |
| 534 9 32 1.076907059976115 | |
| 535 9 33 1.2108206172912048 | |
| 536 9 34 0.16209958555226933 | |
| 537 9 35 -0.3299113957937472 | |
| 538 9 36 0.6554522800302856 | |
| 539 9 37 0.16174529363787826 | |
| 540 9 38 -0.29240606793036505 | |
| 541 9 39 -0.46176581588346366 | |
| 542 9 40 -0.17477146326251614 | |
| 543 9 41 -0.3995362012241799 | |
| 544 9 42 0.40059178672989404 | |
| 545 9 43 -0.7929919952170579 | |
| 546 9 44 -0.9578218797400382 | |
| 547 9 45 0.6699979276194128 | |
| 548 9 46 0.124640931674179 | |
| 549 9 47 0.2408235157851486 | |
| 550 9 48 -0.37844355133357865 | |
| 551 9 49 0.3419993902091072 | |
| 552 9 50 -0.8756232599455132 | |
| 553 9 51 0.44826658990341883 | |
| 554 9 52 0.34398295935380574 | |
| 555 9 53 0.5347536918892395 | |
| 556 9 54 -1.9350416903358045 | |
| 557 10 1 1.0952741660158587 | |
| 558 10 2 1.4967265868544644 | |
| 559 10 3 1.317313646853286 | |
| 560 10 4 -0.3547261718105723 | |
| 561 10 5 -1.4614160888841212 | |
| 562 10 6 0.29727022338276043 | |
| 563 10 7 0.570675320700893 | |
| 564 10 8 0.7553002155559696 | |
| 565 10 9 -0.11076049838197832 | |
| 566 10 10 0.9660975739236584 | |
| 567 10 11 1.3200025237621134 | |
| 568 10 12 0.5761708339969225 | |
| 569 10 13 1.1742614475606779 | |
| 570 10 14 0.49085506706990145 | |
| 571 10 15 0.6676638507840522 | |
| 572 10 16 0.5944615288093544 | |
| 573 10 17 -0.2984472560687408 | |
| 574 10 18 -0.07766539513342252 | |
| 575 10 19 0.871947435911629 | |
| 576 10 20 0.6934287366512422 | |
| 577 10 21 -0.4924561769574538 | |
| 578 10 22 0.13444280641211037 | |
| 579 10 23 1.3356991062361878 | |
| 580 10 24 0.6140473337404266 | |
| 581 10 25 0.1933327343301734 | |
| 582 10 26 1.2592163562496026 | |
| 583 10 27 2.2112073859644212 | |
| 584 10 28 1.7964721240680284 | |
| 585 10 29 0.7632182452387006 | |
| 586 10 30 1.604649899688269 | |
| 587 10 31 1.8797673426317907 | |
| 588 10 32 0.47690705997611715 | |
| 589 10 33 -0.15584604937545876 | |
| 590 10 34 1.8398773633300465 | |
| 591 10 35 2.981199715317363 | |
| 592 10 36 0.8110078355858406 | |
| 593 10 37 1.8617452936378776 | |
| 594 10 38 1.7742605987363014 | |
| 595 10 39 3.2937897396720928 | |
| 596 10 40 3.2918952034041524 | |
| 597 10 41 1.3115749098869323 | |
| 598 10 42 2.911702897841007 | |
| 599 10 43 2.9292302270051636 | |
| 600 10 44 1.964400342482186 | |
| 601 10 45 0.5477757053971892 | |
| 602 10 46 1.9135298205630704 | |
| 603 10 47 1.2741568491184836 | |
| 604 10 48 2.799334226444202 | |
| 605 10 49 3.441999390209105 | |
| 606 10 50 4.391043406721156 | |
| 607 10 51 3.7815999232367545 | |
| 608 10 52 1.3217607371315836 | |
| 609 10 53 3.0125314696670173 | |
| 610 10 54 2.2316249763308633 | |
| 611 >>END_MODULE | |
| 612 >>Per sequence quality scores warn | |
| 613 #Quality Count | |
| 614 8 4.0 | |
| 615 9 4.0 | |
| 616 10 2.0 | |
| 617 11 2.0 | |
| 618 12 4.0 | |
| 619 13 6.0 | |
| 620 14 4.0 | |
| 621 15 11.0 | |
| 622 16 20.0 | |
| 623 17 50.0 | |
| 624 18 98.0 | |
| 625 19 149.0 | |
| 626 20 210.0 | |
| 627 21 275.0 | |
| 628 22 367.0 | |
| 629 23 425.0 | |
| 630 24 518.0 | |
| 631 25 540.0 | |
| 632 26 539.0 | |
| 633 27 532.0 | |
| 634 28 468.0 | |
| 635 29 360.0 | |
| 636 30 234.0 | |
| 637 31 122.0 | |
| 638 32 51.0 | |
| 639 33 5.0 | |
| 640 >>END_MODULE | |
|
13
7d8c56e1a3aa
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 35d722c0cafe2a2f2e4e2f73c265ae56ae237997
iuc
parents:
6
diff
changeset
|
641 >>Per base sequence content pass |
| 1 | 642 #Base G A T C |
| 643 1 21.5 32.64 25.919999999999998 19.939999999999998 | |
| 644 2 24.04 31.72 26.540000000000003 17.7 | |
| 645 3 21.58 28.860000000000003 29.42 20.14 | |
| 646 4 21.58 28.28 28.9 21.240000000000002 | |
| 647 5 21.16 29.720000000000002 28.32 20.8 | |
| 648 6 22.38 29.24 25.72 22.66 | |
| 649 7 21.34 30.320000000000004 28.24 20.1 | |
| 650 8 21.58 29.060000000000002 27.939999999999998 21.42 | |
| 651 9 20.3 28.48 28.58 22.64 | |
| 652 10 21.2 30.84 26.56 21.4 | |
| 653 11 21.14 28.64 27.279999999999998 22.939999999999998 | |
| 654 12 21.32 28.88 28.999999999999996 20.8 | |
| 655 13 20.36 29.220000000000002 28.939999999999998 21.48 | |
| 656 14 20.02 29.2 29.220000000000002 21.560000000000002 | |
| 657 15 20.200000000000003 29.220000000000002 28.38 22.2 | |
| 658 16 20.34 29.38 29.299999999999997 20.979999999999997 | |
| 659 17 20.599999999999998 29.14 28.499999999999996 21.759999999999998 | |
| 660 18 20.599999999999998 27.92 29.4 22.08 | |
| 661 19 21.66 28.46 28.58 21.3 | |
| 662 20 20.0 29.24 28.96 21.8 | |
| 663 21 21.72 28.499999999999996 28.18 21.6 | |
| 664 22 20.52 30.880000000000003 27.3 21.3 | |
| 665 23 20.72 28.9 29.720000000000002 20.66 | |
| 666 24 21.12 28.62 27.58 22.68 | |
| 667 25 21.099999999999998 29.060000000000002 29.160000000000004 20.68 | |
| 668 26 22.18887555022009 28.391356542617046 28.131252501000397 21.288515406162464 | |
| 669 27 21.344268853770753 28.525705141028208 28.765753150630125 21.364272854570913 | |
| 670 28 19.34 30.54 27.46 22.66 | |
| 671 29 20.90418083616723 29.12582516503301 29.045809161832363 20.924184836967395 | |
| 672 30 21.099999999999998 29.4 27.439999999999998 22.06 | |
| 673 31 20.84 28.04 28.660000000000004 22.46 | |
| 674 32 19.847939175670266 28.371348539415763 28.7515006002401 23.02921168467387 | |
| 675 33 22.084416883376676 28.62572514502901 27.265453090618124 22.024404880976196 | |
| 676 34 21.304260852170433 29.285857171434287 27.265453090618124 22.144428885777156 | |
| 677 35 21.084216843368676 29.425885177035404 28.225645129025807 21.264252850570113 | |
| 678 36 21.404280856171233 28.665733146629325 28.805761152230446 21.124224844968996 | |
| 679 37 20.888355342136855 29.43177270908363 28.53141256502601 21.1484593837535 | |
| 680 38 21.864372874574915 29.02580516103221 28.065613122624526 21.044208841768352 | |
| 681 39 21.928771508603443 28.251300520208083 27.050820328131252 22.769107643057225 | |
| 682 40 21.32 28.499999999999996 27.82 22.36 | |
| 683 41 21.673003802281368 28.116870122073244 27.61656994196518 22.59355613368021 | |
| 684 42 22.29337602561537 28.036822093255953 27.71662997798679 21.953171903141886 | |
| 685 43 21.244248849769953 28.425685137027408 27.825565113022606 22.504500900180034 | |
| 686 44 21.404280856171233 28.985797159431886 27.545509101820365 22.064412882576516 | |
| 687 45 21.86 29.28 26.740000000000002 22.12 | |
| 688 46 21.26 27.54 27.74 23.46 | |
| 689 47 21.628651460584233 28.271308523409367 28.051220488195277 22.048819527811126 | |
| 690 48 21.279999999999998 28.439999999999998 26.400000000000002 23.880000000000003 | |
| 691 49 21.044208841768352 29.045809161832363 27.185437087417487 22.724544908981798 | |
| 692 50 21.82873149259704 28.15126050420168 26.810724289715886 23.209283713485394 | |
| 693 51 21.028411364545818 27.73109243697479 28.011204481792717 23.229291716686674 | |
| 694 52 21.824364872974595 30.146029205841167 25.94518903780756 22.084416883376676 | |
| 695 53 21.164232846569313 28.325665133026607 28.045609121824366 22.464492898579717 | |
| 696 54 21.53907976692787 27.024311834438418 26.90375728350412 24.5328511151296 | |
| 697 >>END_MODULE | |
| 698 >>Per sequence GC content warn | |
| 699 #GC Content Count | |
| 700 0 3.0 | |
| 701 1 5.0 | |
| 702 2 7.0 | |
| 703 3 7.0 | |
| 704 4 7.0 | |
| 705 5 5.0 | |
| 706 6 2.0 | |
| 707 7 1.0 | |
| 708 8 1.5 | |
| 709 9 2.0 | |
| 710 10 1.5 | |
| 711 11 1.0 | |
| 712 12 2.5 | |
| 713 13 4.0 | |
| 714 14 4.0 | |
| 715 15 4.0 | |
| 716 16 5.0 | |
| 717 17 6.0 | |
| 718 18 11.0 | |
| 719 19 19.5 | |
| 720 20 23.0 | |
| 721 21 37.5 | |
| 722 22 52.0 | |
| 723 23 61.0 | |
| 724 24 70.0 | |
| 725 25 79.0 | |
| 726 26 88.0 | |
| 727 27 117.5 | |
| 728 28 147.0 | |
| 729 29 159.5 | |
| 730 30 172.0 | |
| 731 31 203.0 | |
| 732 32 243.0 | |
| 733 33 252.0 | |
| 734 34 290.0 | |
| 735 35 328.0 | |
| 736 36 330.0 | |
| 737 37 332.0 | |
| 738 38 332.5 | |
| 739 39 333.0 | |
| 740 40 342.0 | |
| 741 41 351.0 | |
| 742 42 343.5 | |
| 743 43 336.0 | |
| 744 44 318.5 | |
| 745 45 279.5 | |
| 746 46 258.0 | |
| 747 47 254.5 | |
| 748 48 251.0 | |
| 749 49 234.5 | |
| 750 50 218.0 | |
| 751 51 209.5 | |
| 752 52 201.0 | |
| 753 53 198.5 | |
| 754 54 196.0 | |
| 755 55 177.0 | |
| 756 56 162.5 | |
| 757 57 167.0 | |
| 758 58 147.0 | |
| 759 59 127.0 | |
| 760 60 106.5 | |
| 761 61 86.0 | |
| 762 62 85.0 | |
| 763 63 84.0 | |
| 764 64 61.5 | |
| 765 65 39.0 | |
| 766 66 42.5 | |
| 767 67 46.0 | |
| 768 68 34.0 | |
| 769 69 17.0 | |
| 770 70 12.0 | |
| 771 71 14.0 | |
| 772 72 16.0 | |
| 773 73 12.5 | |
| 774 74 9.0 | |
| 775 75 6.5 | |
| 776 76 4.0 | |
| 777 77 4.5 | |
| 778 78 5.0 | |
| 779 79 5.0 | |
| 780 80 5.0 | |
| 781 81 3.0 | |
| 782 82 1.0 | |
| 783 83 1.0 | |
| 784 84 1.0 | |
| 785 85 1.0 | |
| 786 86 1.0 | |
| 787 87 1.0 | |
| 788 88 1.0 | |
| 789 89 1.0 | |
| 790 90 2.0 | |
| 791 91 3.0 | |
| 792 92 2.5 | |
| 793 93 2.0 | |
| 794 94 2.0 | |
| 795 95 3.0 | |
| 796 96 4.0 | |
| 797 97 5.0 | |
| 798 98 6.0 | |
| 799 99 3.5 | |
| 800 100 1.0 | |
| 801 >>END_MODULE | |
| 802 >>Per base N content pass | |
| 803 #Base N-Count | |
| 804 1 0.0 | |
| 805 2 0.0 | |
| 806 3 0.0 | |
| 807 4 0.0 | |
| 808 5 0.0 | |
| 809 6 0.0 | |
| 810 7 0.0 | |
| 811 8 0.0 | |
| 812 9 0.0 | |
| 813 10 0.0 | |
| 814 11 0.0 | |
| 815 12 0.0 | |
| 816 13 0.0 | |
| 817 14 0.0 | |
| 818 15 0.0 | |
| 819 16 0.0 | |
| 820 17 0.0 | |
| 821 18 0.0 | |
| 822 19 0.0 | |
| 823 20 0.0 | |
| 824 21 0.0 | |
| 825 22 0.0 | |
| 826 23 0.0 | |
| 827 24 0.0 | |
| 828 25 0.0 | |
| 829 26 0.04 | |
| 830 27 0.02 | |
| 831 28 0.0 | |
| 832 29 0.02 | |
| 833 30 0.0 | |
| 834 31 0.0 | |
| 835 32 0.04 | |
| 836 33 0.02 | |
| 837 34 0.02 | |
| 838 35 0.02 | |
| 839 36 0.02 | |
| 840 37 0.04 | |
| 841 38 0.02 | |
| 842 39 0.04 | |
| 843 40 0.0 | |
| 844 41 0.06 | |
| 845 42 0.06 | |
| 846 43 0.02 | |
| 847 44 0.02 | |
| 848 45 0.0 | |
| 849 46 0.0 | |
| 850 47 0.04 | |
| 851 48 0.0 | |
| 852 49 0.02 | |
| 853 50 0.04 | |
| 854 51 0.04 | |
| 855 52 0.02 | |
| 856 53 0.02 | |
| 857 54 0.45999999999999996 | |
| 858 >>END_MODULE | |
| 859 >>Sequence Length Distribution pass | |
| 860 #Length Count | |
| 861 54 5000.0 | |
| 862 >>END_MODULE | |
| 863 >>Sequence Duplication Levels pass | |
| 864 #Total Deduplicated Percentage 99.52 | |
| 865 #Duplication Level Percentage of deduplicated Percentage of total | |
| 866 1 99.81913183279742 99.33999999999999 | |
| 867 2 0.08038585209003216 0.16 | |
| 868 3 0.04019292604501608 0.12 | |
| 869 4 0.0 0.0 | |
| 870 5 0.02009646302250804 0.1 | |
| 871 6 0.0 0.0 | |
| 872 7 0.04019292604501608 0.27999999999999997 | |
| 873 8 0.0 0.0 | |
| 874 9 0.0 0.0 | |
| 875 >10 0.0 0.0 | |
| 876 >50 0.0 0.0 | |
| 877 >100 0.0 0.0 | |
| 878 >500 0.0 0.0 | |
| 879 >1k 0.0 0.0 | |
| 880 >5k 0.0 0.0 | |
| 881 >10k+ 0.0 0.0 | |
| 882 >>END_MODULE | |
| 883 >>Overrepresented sequences warn | |
| 884 #Sequence Count Percentage Possible Source | |
| 885 CGGAAGAGCGGTTCAGCAGGAATGCCGAGATCGGAAGAGCGGTTCAGCAGGAAT 7 0.13999999999999999 Illumina Paired End PCR Primer 2 (96% over 33bp) | |
| 886 CGGTTCAGCAGGAATGCCGAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAGAC 7 0.13999999999999999 Illumina Paired End PCR Primer 2 (100% over 35bp) | |
| 887 >>END_MODULE | |
| 888 >>Adapter Content pass | |
|
13
7d8c56e1a3aa
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 35d722c0cafe2a2f2e4e2f73c265ae56ae237997
iuc
parents:
6
diff
changeset
|
889 #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter |
|
7d8c56e1a3aa
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 35d722c0cafe2a2f2e4e2f73c265ae56ae237997
iuc
parents:
6
diff
changeset
|
890 1 0.0 0.0 0.0 0.0 0.0 |
|
7d8c56e1a3aa
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 35d722c0cafe2a2f2e4e2f73c265ae56ae237997
iuc
parents:
6
diff
changeset
|
891 2 0.02 0.0 0.0 0.0 0.0 |
|
7d8c56e1a3aa
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 35d722c0cafe2a2f2e4e2f73c265ae56ae237997
iuc
parents:
6
diff
changeset
|
892 3 0.02 0.0 0.0 0.0 0.0 |
|
7d8c56e1a3aa
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 35d722c0cafe2a2f2e4e2f73c265ae56ae237997
iuc
parents:
6
diff
changeset
|
893 4 0.02 0.0 0.0 0.0 0.0 |
|
7d8c56e1a3aa
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 35d722c0cafe2a2f2e4e2f73c265ae56ae237997
iuc
parents:
6
diff
changeset
|
894 5 0.02 0.0 0.0 0.0 0.0 |
|
7d8c56e1a3aa
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 35d722c0cafe2a2f2e4e2f73c265ae56ae237997
iuc
parents:
6
diff
changeset
|
895 6 0.02 0.0 0.0 0.0 0.0 |
|
7d8c56e1a3aa
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 35d722c0cafe2a2f2e4e2f73c265ae56ae237997
iuc
parents:
6
diff
changeset
|
896 7 0.02 0.0 0.0 0.0 0.0 |
|
7d8c56e1a3aa
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 35d722c0cafe2a2f2e4e2f73c265ae56ae237997
iuc
parents:
6
diff
changeset
|
897 8 0.02 0.0 0.0 0.0 0.0 |
|
7d8c56e1a3aa
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 35d722c0cafe2a2f2e4e2f73c265ae56ae237997
iuc
parents:
6
diff
changeset
|
898 9 0.02 0.0 0.0 0.0 0.0 |
|
7d8c56e1a3aa
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 35d722c0cafe2a2f2e4e2f73c265ae56ae237997
iuc
parents:
6
diff
changeset
|
899 10 0.02 0.0 0.0 0.0 0.0 |
|
7d8c56e1a3aa
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 35d722c0cafe2a2f2e4e2f73c265ae56ae237997
iuc
parents:
6
diff
changeset
|
900 11 0.02 0.0 0.0 0.0 0.0 |
|
7d8c56e1a3aa
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 35d722c0cafe2a2f2e4e2f73c265ae56ae237997
iuc
parents:
6
diff
changeset
|
901 12 0.02 0.0 0.0 0.0 0.0 |
|
7d8c56e1a3aa
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 35d722c0cafe2a2f2e4e2f73c265ae56ae237997
iuc
parents:
6
diff
changeset
|
902 13 0.02 0.0 0.0 0.0 0.0 |
|
7d8c56e1a3aa
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 35d722c0cafe2a2f2e4e2f73c265ae56ae237997
iuc
parents:
6
diff
changeset
|
903 14 0.02 0.0 0.0 0.0 0.0 |
|
7d8c56e1a3aa
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 35d722c0cafe2a2f2e4e2f73c265ae56ae237997
iuc
parents:
6
diff
changeset
|
904 15 0.02 0.0 0.0 0.0 0.0 |
|
7d8c56e1a3aa
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 35d722c0cafe2a2f2e4e2f73c265ae56ae237997
iuc
parents:
6
diff
changeset
|
905 16 0.02 0.0 0.0 0.0 0.0 |
|
7d8c56e1a3aa
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 35d722c0cafe2a2f2e4e2f73c265ae56ae237997
iuc
parents:
6
diff
changeset
|
906 17 0.02 0.0 0.0 0.0 0.0 |
|
7d8c56e1a3aa
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 35d722c0cafe2a2f2e4e2f73c265ae56ae237997
iuc
parents:
6
diff
changeset
|
907 18 0.02 0.0 0.0 0.0 0.0 |
|
7d8c56e1a3aa
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 35d722c0cafe2a2f2e4e2f73c265ae56ae237997
iuc
parents:
6
diff
changeset
|
908 19 0.06 0.0 0.0 0.0 0.0 |
|
7d8c56e1a3aa
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 35d722c0cafe2a2f2e4e2f73c265ae56ae237997
iuc
parents:
6
diff
changeset
|
909 20 0.36 0.0 0.0 0.0 0.0 |
|
7d8c56e1a3aa
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 35d722c0cafe2a2f2e4e2f73c265ae56ae237997
iuc
parents:
6
diff
changeset
|
910 21 0.36 0.0 0.0 0.0 0.0 |
|
7d8c56e1a3aa
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 35d722c0cafe2a2f2e4e2f73c265ae56ae237997
iuc
parents:
6
diff
changeset
|
911 22 0.36 0.0 0.0 0.0 0.0 |
|
7d8c56e1a3aa
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 35d722c0cafe2a2f2e4e2f73c265ae56ae237997
iuc
parents:
6
diff
changeset
|
912 23 0.36 0.0 0.0 0.0 0.0 |
|
7d8c56e1a3aa
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 35d722c0cafe2a2f2e4e2f73c265ae56ae237997
iuc
parents:
6
diff
changeset
|
913 24 0.36 0.0 0.0 0.0 0.0 |
|
7d8c56e1a3aa
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 35d722c0cafe2a2f2e4e2f73c265ae56ae237997
iuc
parents:
6
diff
changeset
|
914 25 0.4 0.0 0.0 0.0 0.0 |
|
7d8c56e1a3aa
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 35d722c0cafe2a2f2e4e2f73c265ae56ae237997
iuc
parents:
6
diff
changeset
|
915 26 0.4 0.0 0.0 0.0 0.0 |
|
7d8c56e1a3aa
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 35d722c0cafe2a2f2e4e2f73c265ae56ae237997
iuc
parents:
6
diff
changeset
|
916 27 0.42 0.0 0.0 0.0 0.0 |
|
7d8c56e1a3aa
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 35d722c0cafe2a2f2e4e2f73c265ae56ae237997
iuc
parents:
6
diff
changeset
|
917 28 0.62 0.0 0.0 0.0 0.0 |
|
7d8c56e1a3aa
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 35d722c0cafe2a2f2e4e2f73c265ae56ae237997
iuc
parents:
6
diff
changeset
|
918 29 0.66 0.0 0.0 0.0 0.0 |
|
7d8c56e1a3aa
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 35d722c0cafe2a2f2e4e2f73c265ae56ae237997
iuc
parents:
6
diff
changeset
|
919 30 0.68 0.0 0.0 0.0 0.0 |
|
7d8c56e1a3aa
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 35d722c0cafe2a2f2e4e2f73c265ae56ae237997
iuc
parents:
6
diff
changeset
|
920 31 0.68 0.0 0.0 0.0 0.0 |
|
7d8c56e1a3aa
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 35d722c0cafe2a2f2e4e2f73c265ae56ae237997
iuc
parents:
6
diff
changeset
|
921 32 0.68 0.0 0.0 0.0 0.0 |
|
7d8c56e1a3aa
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 35d722c0cafe2a2f2e4e2f73c265ae56ae237997
iuc
parents:
6
diff
changeset
|
922 33 0.68 0.0 0.0 0.0 0.0 |
|
7d8c56e1a3aa
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 35d722c0cafe2a2f2e4e2f73c265ae56ae237997
iuc
parents:
6
diff
changeset
|
923 34 0.7 0.0 0.0 0.0 0.0 |
|
7d8c56e1a3aa
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 35d722c0cafe2a2f2e4e2f73c265ae56ae237997
iuc
parents:
6
diff
changeset
|
924 35 0.76 0.0 0.0 0.0 0.0 |
|
7d8c56e1a3aa
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 35d722c0cafe2a2f2e4e2f73c265ae56ae237997
iuc
parents:
6
diff
changeset
|
925 36 0.8 0.0 0.0 0.0 0.0 |
|
7d8c56e1a3aa
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 35d722c0cafe2a2f2e4e2f73c265ae56ae237997
iuc
parents:
6
diff
changeset
|
926 37 0.88 0.0 0.0 0.0 0.0 |
|
7d8c56e1a3aa
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 35d722c0cafe2a2f2e4e2f73c265ae56ae237997
iuc
parents:
6
diff
changeset
|
927 38 1.0 0.0 0.0 0.0 0.0 |
|
7d8c56e1a3aa
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 35d722c0cafe2a2f2e4e2f73c265ae56ae237997
iuc
parents:
6
diff
changeset
|
928 39 1.12 0.0 0.0 0.0 0.0 |
|
7d8c56e1a3aa
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 35d722c0cafe2a2f2e4e2f73c265ae56ae237997
iuc
parents:
6
diff
changeset
|
929 40 1.22 0.0 0.0 0.0 0.0 |
|
7d8c56e1a3aa
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 35d722c0cafe2a2f2e4e2f73c265ae56ae237997
iuc
parents:
6
diff
changeset
|
930 41 1.38 0.0 0.0 0.0 0.0 |
|
7d8c56e1a3aa
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 35d722c0cafe2a2f2e4e2f73c265ae56ae237997
iuc
parents:
6
diff
changeset
|
931 42 1.48 0.0 0.0 0.0 0.0 |
| 1 | 932 >>END_MODULE |
| 933 >>Kmer Content pass | |
| 934 >>END_MODULE |