Mercurial > repos > davidvanzessen > plotting_merged

diff r_wrapper.sh @ 41:46c5d9d396a5 draft

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Uploaded
author davidvanzessen
date Fri, 22 Nov 2013 07:51:11 -0500
parents d26e8c208b5f
children 1b3ef7b2f4a0
line wrap: on
line diff
--- a/r_wrapper.sh	Fri Nov 22 07:51:04 2013 -0500
+++ b/r_wrapper.sh	Fri Nov 22 07:51:11 2013 -0500
@@ -6,9 +6,10 @@
 inputFile=$1
 outputFile=$2
 outputDir=$3
+clonalType=$4
 dir="$(cd "$(dirname "$0")" && pwd)"
 mkdir $3
-Rscript --verbose $dir/RScript.r $inputFile $outputDir $outputDir 2>&1
+Rscript --verbose $dir/RScript.r $inputFile $outputDir $outputDir $clonalType 2>&1
 echo "<html>" >> $2
 echo "<img src='VPlot.png'/>" >> $2
 echo "<img src='DPlot.png'/>" >> $2