changeset 41:46c5d9d396a5 draft

Uploaded
author davidvanzessen
date Fri, 22 Nov 2013 07:51:11 -0500
parents 2e2a29d505c7
children af2834de221c
files r_wrapper.sh
diffstat 1 files changed, 2 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/r_wrapper.sh	Fri Nov 22 07:51:04 2013 -0500
+++ b/r_wrapper.sh	Fri Nov 22 07:51:11 2013 -0500
@@ -6,9 +6,10 @@
 inputFile=$1
 outputFile=$2
 outputDir=$3
+clonalType=$4
 dir="$(cd "$(dirname "$0")" && pwd)"
 mkdir $3
-Rscript --verbose $dir/RScript.r $inputFile $outputDir $outputDir 2>&1
+Rscript --verbose $dir/RScript.r $inputFile $outputDir $outputDir $clonalType 2>&1
 echo "<html>" >> $2
 echo "<img src='VPlot.png'/>" >> $2
 echo "<img src='DPlot.png'/>" >> $2