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changeset 5:064dbe9f9333 draft

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planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/sortmerna/ commit 4d9df680f128bc18183ebba6f85fc24f11207571-dirty
author bebatut
date Wed, 28 Oct 2015 08:36:01 -0400
parents 5d7ec21f6d4c
children 817fb14fc739
files sortmerna.xml
diffstat 1 files changed, 14 insertions(+), 5 deletions(-) [+]
line wrap: on
line diff
--- a/sortmerna.xml	Wed Oct 28 08:29:15 2015 -0400
+++ b/sortmerna.xml	Wed Oct 28 08:36:01 2015 -0400
@@ -199,26 +199,35 @@
     </inputs>
     
     <outputs>
-        <data format_source="input_sequence_file" name="aligned_sequence_file" metadata="input_sequence_file" from_work_dir="aligned.dat">
+        <data format_source="input_sequence_file" name="aligned_sequence_file" 
+            metadata="input_sequence_file" from_work_dir="aligned.dat"
+            label="Aligned sequences on ${on_string} (SortMeRNA)">
             <filter>((fastx['test']))</filter>
         </data>
 
-        <data format_source="input_sequence_file" name="rejected_sequence_file" metadata="input_sequence_file" from_work_dir="other_file.dat">
+        <data format_source="input_sequence_file" name="rejected_sequence_file" 
+            metadata="input_sequence_file" from_work_dir="other_file.dat"
+            label="Rejected sequences on ${on_string} (SortMeRNA)">
             <filter>((fastx['test'] and fastx['rejected']))</filter>
         </data>
 
-        <data format="sam" name="sam_alignment_file" metadata="input_sequence_file" from_work_dir="aligned.sam">
+        <data format="sam" name="sam_alignment_file" metadata="input_sequence_file"
+            from_work_dir="aligned.sam"
+            label="SAM alignments on ${on_string} (SortMeRNA)">
             <filter>((sam['test']]))</filter>
         </data>
 
-        <data format="tabular" name="blast_output_file" metadata="input_sequence_file" from_work_dir="aligned.blast">
+        <data format="tabular" name="blast_output_file" 
+            metadata="input_sequence_file" from_work_dir="aligned.blast"
+            label="Blast alignments on ${on_string} (SortMeRNA)">
             <filter>((blast['test']))</filter>
             <change_format>
                 <when input="blast.format" value="0" format="txt" />
             </change_format>
         </data>
 
-        <data format="txt" name="output_log" metadata="input_sequence_file" from_work_dir="aligned.log">
+        <data format="txt" name="output_log" metadata="input_sequence_file" 
+            from_work_dir="aligned.log" label="Log on ${on_string} (SortMeRNA)">
             <filter>log</filter>
         </data>
     </outputs>