Mercurial > repos > trinity_ctat > test_ctat_genome_res_lib_dm

changeset 13:dc65863e726f draft

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Uploaded
author trinity_ctat
date Mon, 02 Jul 2018 14:14:25 -0400
parents 94a7f5d8e350
children 3b4a734773b2
files data_manager/add_ctat_resource_lib.xml
diffstat 1 files changed, 1 insertions(+), 21 deletions(-) [+]
line wrap: on
line diff
--- a/data_manager/add_ctat_resource_lib.xml	Mon Jul 02 13:59:14 2018 -0400
+++ b/data_manager/add_ctat_resource_lib.xml	Mon Jul 02 14:14:25 2018 -0400
@@ -9,27 +9,7 @@
     </requirements>
     <command detect_errors="default">
         <![CDATA[
-        python $__tool_directory__/add_ctat_resource_lib.py 
-            --output_filename "${out_file}" 
-            --display_name "${display_name}" 
-            #if str( $genome_resource_library.download ) == "true":
-                --download_url "${genome_resource_library.download_url}" 
-                --download_location "${genome_resource_library.download_destination}"
-                #if str( $genome_resource_library.force_new_download ) == "true":
-                    --new_archive_download
-                #end if
-            #else
-                #if str( ${genome_resource_library.library_status.needs_build} ) == "true":
-                    --source_location "${genome_resource_library.library_status.source_location}"
-                    #if str( $genome_resource_library.library_status.rebuild ) == "true":
-                        --rebuild
-                    #end if
-                #endif
-                --build_location "${genome_resource_library.built_library_location}" 
-            #end if
-            #if str( $gmap_build ) == "true":
-                --gmap_build 
-            #end if
+        echo "outfile ${out_file}, displayname ${display_name}"
         ]]>
     </command>
     <inputs>