Mercurial > repos > trinity_ctat > ctat_centrifuge_index_data_manager

changeset 21:2d8ee7f23b7c draft

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Uploaded
author trinity_ctat
date Thu, 26 Apr 2018 18:35:53 -0400
parents 06881857f386
children 205d4b3cc656
files data_manager/add_ctat_centrifuge_index.py
diffstat 1 files changed, 5 insertions(+), 0 deletions(-) [+]
line wrap: on
line diff
--- a/data_manager/add_ctat_centrifuge_index.py	Thu Apr 26 18:22:37 2018 -0400
+++ b/data_manager/add_ctat_centrifuge_index.py	Thu Apr 26 18:35:53 2018 -0400
@@ -232,6 +232,7 @@
         
 def main():
     #Parse Command Line
+    print "At start before parsing arguments."
     parser = argparse.ArgumentParser()
     parser.add_argument('-d', '--download_location', default="", \
         help='This is the download location of the centrifuge index.')
@@ -254,6 +255,10 @@
     # target_directory = params['output_data'][0]['extra_files_path']
     # os.mkdir(target_directory)
 
+    print "Arguments are parsed."
+    print "download location is {:s}".format(str(args.download_location))
+    print "display_name is {:s}".format(str(args.display_name))
+    print "destination path is {:s}".format(str(args.destination_path))
     root_index_dirname = None
     # FIX - Prob don't need index_was_downloaded. Not doing anything with it.
     index_was_downloaded = False