Mercurial > repos > tduigou > icfree_instructor
diff instructor.xml @ 6:df5b3f40c0b6 draft
planemo upload for repository https://github.com/brsynth/icfree-ml commit bb700d24e25b280f75f17f0a25f91062688cbad7
| author | tduigou |
|---|---|
| date | Wed, 15 Mar 2023 10:06:51 +0000 |
| parents | 190889521a9e |
| children | 6f8e7e811333 |
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--- a/instructor.xml Wed Mar 15 09:46:06 2023 +0000 +++ b/instructor.xml Wed Mar 15 10:06:51 2023 +0000 @@ -7,27 +7,27 @@ <expand macro="stdio"/> <command detect_errors="exit_code"><![CDATA[ #set sps = [] - #for $x in $source_plates.keys(): - ln -sfn $source_plates[$x] '.' && - #silent sps.append(str($x)) + #for $x in $source_plates: + ln -sfn '$x' '$x.element_identifier' && + #silent sps.append(str($x.element_identifier)) #end for #set s_sps = '" "'.join(sps) #set sws = [] - #for $x in $source_wells.keys(): - ln -sfn $source_wells[$x] '.' && - #silent sws.append(str($x)) + #for $x in $source_wells: + ln -sfn '$x' '$x.element_identifier' && + #silent sws.append(str($x.element_identifier)) #end for #set s_sws = '" "'.join(sws) #set dps = [] - #for $x in $dest_plates.keys(): - ln -sfn $dest_plates[$x] '.' && - #silent dps.append(str($x)) + #for $x in $dest_plates: + ln -sfn '$x' '$x.element_identifier' && + #silent dps.append(str($x.element_identifier)) #end for #set s_dps = '" "'.join(dps) #set dws = [] - #for $x in $dest_wells.keys(): - ln -sfn $dest_wells[$x] '.' && - #silent dws.append(str($x)) + #for $x in $dest_wells: + ln -sfn '$x' '$x.element_identifier' && + #silent dws.append(str($x.element_identifier)) #end for #set s_dws = '" "'.join(dws) python -m icfree.instructor