Mercurial > repos > simon-gladman > velvet_optimiser_2_2_5
diff tool_dependencies.xml @ 1:7a2387ada498 draft
Uploaded
| author | simon-gladman |
|---|---|
| date | Tue, 16 Jul 2013 01:48:28 -0400 |
| parents | |
| children | d790c804f62a |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_dependencies.xml Tue Jul 16 01:48:28 2013 -0400 @@ -0,0 +1,24 @@ +<?xml version="1.0"?> +<tool_dependency> + <package name="package_velvet_1_2" version="1.2.08"> + <repository changeset_revision="b38f6a7d6ca5" name="package_velvet_1_2" owner="simon-gladman" toolshed="http://testtoolshed.g2.bx.psu.edu" /> + </package> + <set_environment version="1.0"> + <environment_variable name="VELVET_SCRIPT_PATH" action="set_to">$REPOSITORY_INSTALL_DIR</environment_variable> + </set_environment> + <package name="velvetoptimiser_2_2_5" version="2.2.5"> + <install version="1.0"> + <actions> + <action type="download_by_url">http://www.vicbioinformatics.com/VelvetOptimiser-2.2.5.tar.gz</action> + <action type="move_directory_files"> + <source_directory>.</source_directory> + <destination_directory>$INSTALL_DIR/bin</destination_directory> + </action> + <action type="set_environment"> + <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> + </action> + <action type="shell_command">chmod +x $INSTALL_DIR/bin/VelvetOptimiser.pl</action> + </actions> + </install> + </package> +</tool_dependency>
