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1 <tool id="degust" name="Degust" version="1.0.0">
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2 <description>RNA Seq analysis and visualisation.</description>
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3 <command interpreter="python">
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4 degust.py
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5 --tab
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6 --cuffdiff
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7 $dataset
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8 >
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9 $output
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10 </command>
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11 <inputs>
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12 <param name="dataset" type="data" format="tabular" label="Cuffdiff gene/transcript expression testing output" help="Cuffdiff output to visualise."/>
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13 </inputs>
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14 <outputs>
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15 <data name="output" format="html" label="${tool.name} on ${on_string}: html"/>
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16 </outputs>
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17
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18 <help>
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19 **Degust**
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20 RNA Seq analysis and visualisation.
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21
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22 Written by David Powell - Victorian Bioinformatics Consortium 2012 - 2014
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23
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24 Wrapped by Simon Gladman - Victorian Bioinformatics Consortium 2014
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25
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26 0.11.2
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27 ------
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28
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29 Outputs in html format.
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30
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31 ------
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32
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33 Inputs:
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34
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35 CuffDiff gene differential expression dataset
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36 </help>
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37 </tool>
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