Mercurial > repos > rv43 > tomo

changeset 51:5735b3d49897 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload for repository https://github.com/rolfverberg/galaxytools commit 7fb0a76c9852c8ee61ad87d5c2b21372a1f7e608"
author rv43
date Thu, 28 Jul 2022 17:02:40 +0000
parents 79c216516ef9
children 1c7f86ab84aa
files tomo_setup.py tomo_setup.xml
diffstat 2 files changed, 3 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/tomo_setup.py	Thu Jul 28 16:51:25 2022 +0000
+++ b/tomo_setup.py	Thu Jul 28 17:02:40 2022 +0000
@@ -65,6 +65,8 @@
     logging.debug(f'tomoranges = {args.tomo_ranges}')
 
     # Check input file type
+    print(f'inputfiles ({type(args.inputfiles)}):\n{args.inputfiles}')
+    print(f'inputfile_types ({type(args.inputfile_types)}):\n{args.inputfile_types}')
     if isinstance(args.inputfile_types, str) and args.inputfile_types == 'collection':
         input_as_collection = True
     elif isinstance(args.inputfile_types, list):
--- a/tomo_setup.xml	Thu Jul 28 16:51:25 2022 +0000
+++ b/tomo_setup.xml	Thu Jul 28 17:02:40 2022 +0000
@@ -12,7 +12,7 @@
             #end if
             $__tool_directory__/tomo_setup.py
             #if str( $input.type_selector ) == "collection"
-                -i inputfiles.txt
+                -i 'inputfiles.txt'
                 -t 'collection'
             #else:
                 -i #for $s in $input.tomo_sets# '${s.inputs}' #end for#