Mercurial > repos > rv43 > chess_tomo

diff tomo_reduce.py @ 5:543dba81eb15 draft

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planemo upload for repository https://github.com/rolfverberg/galaxytools commit f8c4bdb31c20c468045ad5e6eb255a293244bc6c-dirty
author rv43
date Mon, 20 Mar 2023 18:54:48 +0000
parents 9aa288729b9a
children 05335876d167
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line diff
--- a/tomo_reduce.py	Mon Mar 20 18:44:23 2023 +0000
+++ b/tomo_reduce.py	Mon Mar 20 18:54:48 2023 +0000
@@ -73,13 +73,14 @@
     logging.debug(f'log = {args.log}')
     logging.debug(f'is log stdout? {args.log is sys.stdout}')
     logging.debug(f'log_level = {args.log_level}')
-    return
 
     # Instantiate Tomo object
     tomo = Tomo(galaxy_flag=args.galaxy_flag)
 
     # Read input file
     data = tomo.read(args.input_file)
+    print('data:\n{data.tree}')
+    return
 
     # Generate reduced tomography images
     data = tomo.gen_reduced_data(data, img_x_bounds=args.img_x_bounds)