Mercurial > repos > rnateam > package_segemehl_0_1_6

annotate tool_dependencies.xml @ 2:e9455aa5c7e6 draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author rnateam
date Thu, 17 Oct 2013 04:17:41 -0400
parents b23d4e44a45c
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
15c10db35624 initial uploaded
rnateam
parents:
diff changeset
1 <?xml version="1.0"?>
15c10db35624 initial uploaded
rnateam
parents:
diff changeset
2 <tool_dependency>
15c10db35624 initial uploaded
rnateam
parents:
diff changeset
3 <package name="segemehl" version="0.1.6">
15c10db35624 initial uploaded
rnateam
parents:
diff changeset
4 <install version="1.0">
15c10db35624 initial uploaded
rnateam
parents:
diff changeset
5 <actions>
1
b23d4e44a45c Uploaded
rnateam
parents: 0
diff changeset
6 <action type="download_by_url" target_filename="segemehl_0_1_6_1.tar.gz">http://www.bioinf.uni-leipzig.de/Software/segemehl/segemehl_0_1_6.tar.gz</action>
2
e9455aa5c7e6 Uploaded
rnateam
parents: 1
diff changeset
7 <action type="change_directory">segemehl</action>
0
15c10db35624 initial uploaded
rnateam
parents:
diff changeset
8 <action type="shell_command">make</action>
15c10db35624 initial uploaded
rnateam
parents:
diff changeset
9 <action type="move_file">
15c10db35624 initial uploaded
rnateam
parents:
diff changeset
10 <source>segemehl.x</source>
15c10db35624 initial uploaded
rnateam
parents:
diff changeset
11 <destination>$INSTALL_DIR</destination>
15c10db35624 initial uploaded
rnateam
parents:
diff changeset
12 </action>
15c10db35624 initial uploaded
rnateam
parents:
diff changeset
13 <action type="set_environment">
15c10db35624 initial uploaded
rnateam
parents:
diff changeset
14 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
15c10db35624 initial uploaded
rnateam
parents:
diff changeset
15 </action>
15c10db35624 initial uploaded
rnateam
parents:
diff changeset
16 </actions>
15c10db35624 initial uploaded
rnateam
parents:
diff changeset
17 </install>
15c10db35624 initial uploaded
rnateam
parents:
diff changeset
18 <readme>
15c10db35624 initial uploaded
rnateam
parents:
diff changeset
19 Short read mapping with gaps.
15c10db35624 initial uploaded
rnateam
parents:
diff changeset
20 To compile segemehl a C-compiler is needed, usually GCC.
15c10db35624 initial uploaded
rnateam
parents:
diff changeset
21 http://www.bioinf.uni-leipzig.de/Software/segemehl/
15c10db35624 initial uploaded
rnateam
parents:
diff changeset
22 </readme>
15c10db35624 initial uploaded
rnateam
parents:
diff changeset
23 </package>
15c10db35624 initial uploaded
rnateam
parents:
diff changeset
24 </tool_dependency>