Mercurial > repos > rnateam > package_segemehl_0_1_6

annotate tool_dependencies.xml @ 1:b23d4e44a45c draft

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author rnateam
date Thu, 17 Oct 2013 04:13:16 -0400
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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <package name="segemehl" version="0.1.6">
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4 <install version="1.0">
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5 <actions>
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6 <action type="download_by_url" target_filename="segemehl_0_1_6_1.tar.gz">http://www.bioinf.uni-leipzig.de/Software/segemehl/segemehl_0_1_6.tar.gz</action>
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7 <action type="shell_command">make</action>
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8 <action type="move_file">
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9 <source>segemehl.x</source>
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10 <destination>$INSTALL_DIR</destination>
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11 </action>
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12 <action type="set_environment">
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13 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
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14 </action>
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15 </actions>
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16 </install>
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17 <readme>
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18 Short read mapping with gaps.
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19 To compile segemehl a C-compiler is needed, usually GCC.
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20 http://www.bioinf.uni-leipzig.de/Software/segemehl/
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21 </readme>
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22 </package>
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23 </tool_dependency>