Mercurial > repos > rnateam > package_gemini_0_18_0

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_gemini_0_18_0 commit 0568344062d931c58be6a017998cfb22e702a94e-dirty
author rnateam
date Wed, 09 Dec 2015 10:35:00 -0500
parents 43b3ddd89296
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43b3ddd89296 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_gemini_0_18_0 commit 0568344062d931c58be6a017998cfb22e702a94e-dirty
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1 <?xml version="1.0"?>
43b3ddd89296 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_gemini_0_18_0 commit 0568344062d931c58be6a017998cfb22e702a94e-dirty
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2 <tool_dependency>
43b3ddd89296 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_gemini_0_18_0 commit 0568344062d931c58be6a017998cfb22e702a94e-dirty
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3 <package name="gemini" version="0.18.0">
43b3ddd89296 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_gemini_0_18_0 commit 0568344062d931c58be6a017998cfb22e702a94e-dirty
rnateam
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4 <install version="1.0">
43b3ddd89296 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_gemini_0_18_0 commit 0568344062d931c58be6a017998cfb22e702a94e-dirty
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5 <actions>
43b3ddd89296 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_gemini_0_18_0 commit 0568344062d931c58be6a017998cfb22e702a94e-dirty
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6 <!-- first action is always downloading -->
43b3ddd89296 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_gemini_0_18_0 commit 0568344062d931c58be6a017998cfb22e702a94e-dirty
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7 <action type="download_file">https://raw.githubusercontent.com/arq5x/gemini/59d227a5edf57da03ac77419f07e0e2b806f00c7/gemini/scripts/gemini_install.py</action>
43b3ddd89296 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_gemini_0_18_0 commit 0568344062d931c58be6a017998cfb22e702a94e-dirty
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8
43b3ddd89296 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_gemini_0_18_0 commit 0568344062d931c58be6a017998cfb22e702a94e-dirty
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9 <action type="shell_command">
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cdf92d5af7a4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_gemini_0_18_0 commit 0568344062d931c58be6a017998cfb22e702a94e-dirty
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10 python gemini_install.py $INSTALL_DIR $INSTALL_DIR --nodata
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43b3ddd89296 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_gemini_0_18_0 commit 0568344062d931c58be6a017998cfb22e702a94e-dirty
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11 </action>
43b3ddd89296 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_gemini_0_18_0 commit 0568344062d931c58be6a017998cfb22e702a94e-dirty
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43b3ddd89296 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_gemini_0_18_0 commit 0568344062d931c58be6a017998cfb22e702a94e-dirty
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13 <action type="set_environment">
43b3ddd89296 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_gemini_0_18_0 commit 0568344062d931c58be6a017998cfb22e702a94e-dirty
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14 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/anaconda/bin</environment_variable>
43b3ddd89296 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_gemini_0_18_0 commit 0568344062d931c58be6a017998cfb22e702a94e-dirty
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15 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/gemini/bin</environment_variable>
43b3ddd89296 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_gemini_0_18_0 commit 0568344062d931c58be6a017998cfb22e702a94e-dirty
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16 <environment_variable action="set_to" name="GEMINI_ROOT_DIR">$INSTALL_DIR</environment_variable>
43b3ddd89296 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_gemini_0_18_0 commit 0568344062d931c58be6a017998cfb22e702a94e-dirty
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17 </action>
43b3ddd89296 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_gemini_0_18_0 commit 0568344062d931c58be6a017998cfb22e702a94e-dirty
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18 </actions>
43b3ddd89296 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_gemini_0_18_0 commit 0568344062d931c58be6a017998cfb22e702a94e-dirty
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19 </install>
43b3ddd89296 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_gemini_0_18_0 commit 0568344062d931c58be6a017998cfb22e702a94e-dirty
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20 <readme>Compiling GEMINI requires a recent c++ compiler, usually gcc.</readme>
43b3ddd89296 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_gemini_0_18_0 commit 0568344062d931c58be6a017998cfb22e702a94e-dirty
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21 </package>
43b3ddd89296 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_gemini_0_18_0 commit 0568344062d931c58be6a017998cfb22e702a94e-dirty
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22 </tool_dependency>