Mercurial > repos > rnateam > package_gemini_0_18_0

diff tool_dependencies.xml @ 0:43b3ddd89296 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_gemini_0_18_0 commit 0568344062d931c58be6a017998cfb22e702a94e-dirty
author rnateam
date Wed, 09 Dec 2015 09:56:27 -0500
parents
children cdf92d5af7a4
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Wed Dec 09 09:56:27 2015 -0500
@@ -0,0 +1,22 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="gemini" version="0.18.0">
+        <install version="1.0">
+            <actions>
+                <!-- first action is always downloading -->
+                <action type="download_file">https://raw.githubusercontent.com/arq5x/gemini/59d227a5edf57da03ac77419f07e0e2b806f00c7/gemini/scripts/gemini_install.py</action>
+
+                <action type="shell_command">
+                    python gemini_install.py $INSTALL_DIR $INSTALL_DIR 
+                </action>
+
+                <action type="set_environment">
+                    <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/anaconda/bin</environment_variable>
+                    <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/gemini/bin</environment_variable>
+                    <environment_variable action="set_to" name="GEMINI_ROOT_DIR">$INSTALL_DIR</environment_variable>
+                </action>
+            </actions>
+        </install>
+        <readme>Compiling GEMINI requires a recent c++ compiler, usually gcc.</readme>
+    </package>
+</tool_dependency>