Mercurial > repos > rnateam > mafft

comparison tool_dependencies.xml @ 0:8817d3a35fac draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 4e6896fc58abc9a6f90d97aaf80fde006a071a7d-dirty
author rnateam
date Tue, 16 Jun 2015 10:54:16 -0400
parents
children 95526e9e3808
comparison
equal deleted inserted replaced
-1:000000000000 0:8817d3a35fac
1 <?xml version="1.0"?>
2 <tool_dependency>
3 <package name="mafft" version="7.221">
4 <install version="1.0">
5 <actions>
6 <action type="download_by_url">https://raw.githubusercontent.com/bgruening/download_store/master/MAFFT/mafft-7.221-with-extensions-src.tgz</action>
7 <action type="change_directory">./core</action>
8 <action type="shell_command">sed -i "s|\(PREFIX = \).*$|\1$INSTALL_DIR|" Makefile</action>
9 <action type="shell_command">make clean; make; make install</action>
10 <action type="change_directory">../extensions</action>
11 <action type="shell_command">sed -i "s|\(PREFIX = \).*$|\1$INSTALL_DIR|" Makefile</action>
12 <action type="shell_command">make clean; make; make install</action>
13 <action type="set_environment">
14 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
15 </action>
16 </actions>
17 </install>
18 <readme>
19 </readme>
20 </package>
21 </tool_dependency>