diff flexbar_dsc.xml @ 35:aff2c7260894 draft

integrate dsc and package updates
author rnateam
date Fri, 18 Dec 2015 03:41:00 -0500
parents c53e1cc9ad35
children 8880f22382ae
line wrap: on
line diff
--- a/flexbar_dsc.xml	Fri Dec 18 03:04:46 2015 -0500
+++ b/flexbar_dsc.xml	Fri Dec 18 03:41:00 2015 -0500
@@ -421,14 +421,14 @@
     </stdio>
 
     <outputs>
-        <data format="txt" name="output" metadata_source="reads"/>
         <collection name="list_output" type="list:paired" label="Duplicate List">
       <!-- Use named regex group to grab pattern
            <identifier_0>_<identifier_1>.fq. Here identifier_0 is the list
            identifier in the nested collection and identifier_1 is either
            forward or reverse (for instance samp1_forward.fq).
       -->
-            <discover_datasets pattern="FlexbarOutput_barcode_(?P&lt;identifier_0&gt;[^_]+)_(?P&lt;identifier_1&gt;[^_]+)\.fastq" metadata_source="reads" visible="true" />
+        <data format="txt" name="output" metadata_source="reads"/>
+        <discover_datasets pattern="FlexbarOutput_(?P&lt;identifier_0&gt;[^_]+)_(?P&lt;identifier_1&gt;[^_]+)\.fastq" metadata_source="reads" visible="true" />
         </collection>
     </outputs>