Mercurial > repos > recetox > waveica

annotate waveica.xml @ 6:cf3f2f964d80 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
author recetox
date Thu, 29 Sep 2022 15:20:18 +0000
parents fba892edb9d9
children 385b1221be44
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
6
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
1 <tool id="waveica" name="WaveICA" version="@TOOL_VERSION@+galaxy2" python_template_version="3.5">
0
2461d20911c9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 91376ea7a6736351b0cc086ca1bc6c553fdcda97"
recetox
parents:
diff changeset
2 <description>removal of batch effects for untargeted metabolomics data</description>
4
8b55efc7d117 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit aa8206a01efc1813f2586584782f28a73a17fe86"
recetox
parents: 3
diff changeset
3 <macros>
5
fba892edb9d9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 98e541a75678eee749261630610b946c258fd5f3"
recetox
parents: 4
diff changeset
4 <import>macros.xml</import>
4
8b55efc7d117 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit aa8206a01efc1813f2586584782f28a73a17fe86"
recetox
parents: 3
diff changeset
5 </macros>
5
fba892edb9d9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 98e541a75678eee749261630610b946c258fd5f3"
recetox
parents: 4
diff changeset
6 <expand macro="creator"/>
fba892edb9d9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 98e541a75678eee749261630610b946c258fd5f3"
recetox
parents: 4
diff changeset
7
0
2461d20911c9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 91376ea7a6736351b0cc086ca1bc6c553fdcda97"
recetox
parents:
diff changeset
8 <requirements>
5
fba892edb9d9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 98e541a75678eee749261630610b946c258fd5f3"
recetox
parents: 4
diff changeset
9 <requirement type="package" version="@TOOL_VERSION@">r-recetox-waveica</requirement>
6
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
10 <requirement type="package" version="8.0.0">r-arrow</requirement>
0
2461d20911c9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 91376ea7a6736351b0cc086ca1bc6c553fdcda97"
recetox
parents:
diff changeset
11 </requirements>
2461d20911c9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 91376ea7a6736351b0cc086ca1bc6c553fdcda97"
recetox
parents:
diff changeset
12 <command detect_errors="aggressive"><![CDATA[
2461d20911c9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 91376ea7a6736351b0cc086ca1bc6c553fdcda97"
recetox
parents:
diff changeset
13 Rscript
2461d20911c9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 91376ea7a6736351b0cc086ca1bc6c553fdcda97"
recetox
parents:
diff changeset
14 -e 'source("${__tool_directory__}/waveica_wrapper.R")'
2461d20911c9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 91376ea7a6736351b0cc086ca1bc6c553fdcda97"
recetox
parents:
diff changeset
15
4
8b55efc7d117 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit aa8206a01efc1813f2586584782f28a73a17fe86"
recetox
parents: 3
diff changeset
16 #if $batch_correction.mode == "batchwise":
0
2461d20911c9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 91376ea7a6736351b0cc086ca1bc6c553fdcda97"
recetox
parents:
diff changeset
17 -e 'normalized_data <- waveica(
6
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
18 file = "$input_num.data",
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
19 #if $input_num.input_choice == "2":
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
20 metadata = "$input_num.input_metadata.metadata",
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
21 ext = "$input_num.data.ext,$input_num.input_metadata.metadata.ext",
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
22 #else:
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
23 ext = "$input_num.data.ext",
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
24 #end if
2
d08deef1eb44 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit e33ef984e78721ed37d825c6672795a539a461e1"
recetox
parents: 1
diff changeset
25 wavelet_filter = "$wf.wavelet_filter",
d08deef1eb44 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit e33ef984e78721ed37d825c6672795a539a461e1"
recetox
parents: 1
diff changeset
26 wavelet_length = "$wf.wavelet_length",
d08deef1eb44 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit e33ef984e78721ed37d825c6672795a539a461e1"
recetox
parents: 1
diff changeset
27 k = $k,
4
8b55efc7d117 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit aa8206a01efc1813f2586584782f28a73a17fe86"
recetox
parents: 3
diff changeset
28 t = $batch_correction.t,
8b55efc7d117 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit aa8206a01efc1813f2586584782f28a73a17fe86"
recetox
parents: 3
diff changeset
29 t2 = $batch_correction.t2,
2
d08deef1eb44 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit e33ef984e78721ed37d825c6672795a539a461e1"
recetox
parents: 1
diff changeset
30 alpha = $alpha,
d08deef1eb44 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit e33ef984e78721ed37d825c6672795a539a461e1"
recetox
parents: 1
diff changeset
31 exclude_blanks = $exclude_blanks
0
2461d20911c9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 91376ea7a6736351b0cc086ca1bc6c553fdcda97"
recetox
parents:
diff changeset
32 )'
4
8b55efc7d117 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit aa8206a01efc1813f2586584782f28a73a17fe86"
recetox
parents: 3
diff changeset
33 #else if $batch_correction.mode == "single_batch":
6
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
34 -e 'normalized_data <- waveica_singlebatch(
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
35 file = "$input_num.data",
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
36 #if $input_num.input_choice == "2":
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
37 metadata = "$input_num.input_metadata.metadata",
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
38 ext = "$input_num.data.ext,$input_num.input_metadata.metadata.ext",
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
39 #else:
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
40 ext = "$input_num.data.ext",
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
41 #end if
4
8b55efc7d117 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit aa8206a01efc1813f2586584782f28a73a17fe86"
recetox
parents: 3
diff changeset
42 wavelet_filter = "$wf.wavelet_filter",
8b55efc7d117 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit aa8206a01efc1813f2586584782f28a73a17fe86"
recetox
parents: 3
diff changeset
43 wavelet_length = "$wf.wavelet_length",
8b55efc7d117 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit aa8206a01efc1813f2586584782f28a73a17fe86"
recetox
parents: 3
diff changeset
44 k = $k,
8b55efc7d117 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit aa8206a01efc1813f2586584782f28a73a17fe86"
recetox
parents: 3
diff changeset
45 alpha = $alpha,
8b55efc7d117 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit aa8206a01efc1813f2586584782f28a73a17fe86"
recetox
parents: 3
diff changeset
46 cutoff = $batch_correction.cutoff,
8b55efc7d117 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit aa8206a01efc1813f2586584782f28a73a17fe86"
recetox
parents: 3
diff changeset
47 exclude_blanks = $exclude_blanks
8b55efc7d117 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit aa8206a01efc1813f2586584782f28a73a17fe86"
recetox
parents: 3
diff changeset
48 )'
8b55efc7d117 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit aa8206a01efc1813f2586584782f28a73a17fe86"
recetox
parents: 3
diff changeset
49 #end if
0
2461d20911c9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 91376ea7a6736351b0cc086ca1bc6c553fdcda97"
recetox
parents:
diff changeset
50
6
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
51 -e 'store_data(normalized_data, "$normalized_data", "$input_num.data.ext")'
0
2461d20911c9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 91376ea7a6736351b0cc086ca1bc6c553fdcda97"
recetox
parents:
diff changeset
52 ]]></command>
2461d20911c9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 91376ea7a6736351b0cc086ca1bc6c553fdcda97"
recetox
parents:
diff changeset
53
2461d20911c9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 91376ea7a6736351b0cc086ca1bc6c553fdcda97"
recetox
parents:
diff changeset
54 <inputs>
6
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
55 <conditional name="input_num">
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
56 <param name="input_choice" type="select" label="Choose input files:">
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
57 <option value="1" selected="true">1</option>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
58 <option value="2">2</option>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
59 </param>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
60 <when value="1">
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
61 <expand macro="input_data"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
62 </when>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
63 <when value="2">
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
64 <section name="input_metadata" title="Input metadata table" expanded="true">
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
65 <param name="metadata" label="Input metadata" type="data" format="csv,tsv,parquet" help="" />
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
66 </section>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
67 <expand macro="input_data"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
68 </when>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
69 </conditional>
5
fba892edb9d9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 98e541a75678eee749261630610b946c258fd5f3"
recetox
parents: 4
diff changeset
70 <expand macro="general_parameters"/>
fba892edb9d9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 98e541a75678eee749261630610b946c258fd5f3"
recetox
parents: 4
diff changeset
71 <expand macro="wf"/>
4
8b55efc7d117 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit aa8206a01efc1813f2586584782f28a73a17fe86"
recetox
parents: 3
diff changeset
72 <conditional name="batch_correction">
5
fba892edb9d9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 98e541a75678eee749261630610b946c258fd5f3"
recetox
parents: 4
diff changeset
73 <param name="mode" type="select" label="Batch correction mode" help="'multiple batches' takes into account
fba892edb9d9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 98e541a75678eee749261630610b946c258fd5f3"
recetox
parents: 4
diff changeset
74 inter- and intrabatch intensity drift; 'single batch' relies only on the injection order of the samples and
fba892edb9d9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 98e541a75678eee749261630610b946c258fd5f3"
recetox
parents: 4
diff changeset
75 requires no batch information [2]">
4
8b55efc7d117 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit aa8206a01efc1813f2586584782f28a73a17fe86"
recetox
parents: 3
diff changeset
76 <option value="batchwise" selected="true">Multiple batches</option>
8b55efc7d117 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit aa8206a01efc1813f2586584782f28a73a17fe86"
recetox
parents: 3
diff changeset
77 <option value="single_batch">Single batch (or no batch information)</option>
2
d08deef1eb44 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit e33ef984e78721ed37d825c6672795a539a461e1"
recetox
parents: 1
diff changeset
78 </param>
4
8b55efc7d117 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit aa8206a01efc1813f2586584782f28a73a17fe86"
recetox
parents: 3
diff changeset
79 <when value="batchwise">
5
fba892edb9d9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 98e541a75678eee749261630610b946c258fd5f3"
recetox
parents: 4
diff changeset
80 <expand macro="batchwise_parameters"/>
fba892edb9d9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 98e541a75678eee749261630610b946c258fd5f3"
recetox
parents: 4
diff changeset
81 </when>
4
8b55efc7d117 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit aa8206a01efc1813f2586584782f28a73a17fe86"
recetox
parents: 3
diff changeset
82 <when value="single_batch">
5
fba892edb9d9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 98e541a75678eee749261630610b946c258fd5f3"
recetox
parents: 4
diff changeset
83 <expand macro="singlebatch_parameters"/>
2
d08deef1eb44 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit e33ef984e78721ed37d825c6672795a539a461e1"
recetox
parents: 1
diff changeset
84 </when>
d08deef1eb44 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit e33ef984e78721ed37d825c6672795a539a461e1"
recetox
parents: 1
diff changeset
85 </conditional>
5
fba892edb9d9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 98e541a75678eee749261630610b946c258fd5f3"
recetox
parents: 4
diff changeset
86 <expand macro="exclude_blanks"/>
0
2461d20911c9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 91376ea7a6736351b0cc086ca1bc6c553fdcda97"
recetox
parents:
diff changeset
87 </inputs>
2461d20911c9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 91376ea7a6736351b0cc086ca1bc6c553fdcda97"
recetox
parents:
diff changeset
88
5
fba892edb9d9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 98e541a75678eee749261630610b946c258fd5f3"
recetox
parents: 4
diff changeset
89 <expand macro="outputs"/>
0
2461d20911c9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 91376ea7a6736351b0cc086ca1bc6c553fdcda97"
recetox
parents:
diff changeset
90
2461d20911c9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 91376ea7a6736351b0cc086ca1bc6c553fdcda97"
recetox
parents:
diff changeset
91 <tests>
6
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
92 <test><!-- TEST 1 -->
5
fba892edb9d9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 98e541a75678eee749261630610b946c258fd5f3"
recetox
parents: 4
diff changeset
93 <param name="data" value="input_data.csv" ftype="csv"/>
fba892edb9d9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 98e541a75678eee749261630610b946c258fd5f3"
recetox
parents: 4
diff changeset
94 <param name="mode" value="batchwise"/>
fba892edb9d9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 98e541a75678eee749261630610b946c258fd5f3"
recetox
parents: 4
diff changeset
95 <param name="wavelet_filter" value="d"/>
fba892edb9d9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 98e541a75678eee749261630610b946c258fd5f3"
recetox
parents: 4
diff changeset
96 <param name="filter_length" value="2"/>
fba892edb9d9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 98e541a75678eee749261630610b946c258fd5f3"
recetox
parents: 4
diff changeset
97 <param name="k" value="20"/>
fba892edb9d9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 98e541a75678eee749261630610b946c258fd5f3"
recetox
parents: 4
diff changeset
98 <param name="t" value="0.05"/>
fba892edb9d9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 98e541a75678eee749261630610b946c258fd5f3"
recetox
parents: 4
diff changeset
99 <param name="t2" value="0.05"/>
fba892edb9d9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 98e541a75678eee749261630610b946c258fd5f3"
recetox
parents: 4
diff changeset
100 <param name="alpha" value="0"/>
6
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
101 <output name="normalized_data" file="normalized_data.csv"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
102 </test>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
103 <test><!-- TEST 2 -->
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
104 <param name="data" value="input_data.tsv" ftype="tsv"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
105 <param name="mode" value="batchwise"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
106 <param name="wavelet_filter" value="d"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
107 <param name="filter_length" value="2"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
108 <param name="k" value="20"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
109 <param name="t" value="0.05"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
110 <param name="t2" value="0.05"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
111 <param name="alpha" value="0"/>
5
fba892edb9d9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 98e541a75678eee749261630610b946c258fd5f3"
recetox
parents: 4
diff changeset
112 <output name="normalized_data" file="normalized_data.tsv"/>
2
d08deef1eb44 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit e33ef984e78721ed37d825c6672795a539a461e1"
recetox
parents: 1
diff changeset
113 </test>
6
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
114 <test><!-- TEST 3 -->
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
115 <param name="data" value="input_data.parquet" ftype="parquet"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
116 <param name="mode" value="batchwise"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
117 <param name="wavelet_filter" value="d"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
118 <param name="filter_length" value="2"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
119 <param name="k" value="20"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
120 <param name="t" value="0.05"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
121 <param name="t2" value="0.05"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
122 <param name="alpha" value="0"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
123 <output name="normalized_data" file="normalized_data.parquet"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
124 </test>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
125 <test><!-- TEST 4 -->
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
126 <param name="input_choice" value="2"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
127 <param name="data" value="feature_table.csv" ftype="csv"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
128 <param name="metadata" value="metadata.csv" ftype="csv"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
129 <param name="mode" value="batchwise"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
130 <param name="wavelet_filter" value="d"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
131 <param name="filter_length" value="2"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
132 <param name="k" value="20"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
133 <param name="t" value="0.05"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
134 <param name="t2" value="0.05"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
135 <param name="alpha" value="0"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
136 <output name="normalized_data" file="normalized_data.csv"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
137 </test>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
138 <test><!-- TEST 5 -->
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
139 <param name="input_choice" value="2"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
140 <param name="data" value="feature_table.tsv" ftype="tsv"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
141 <param name="metadata" value="metadata.tsv" ftype="tsv"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
142 <param name="mode" value="batchwise"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
143 <param name="wavelet_filter" value="d"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
144 <param name="filter_length" value="2"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
145 <param name="k" value="20"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
146 <param name="t" value="0.05"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
147 <param name="t2" value="0.05"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
148 <param name="alpha" value="0"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
149 <output name="normalized_data" file="normalized_data.tsv"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
150 </test>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
151 <test><!-- TEST 6 -->
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
152 <param name="input_choice" value="2"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
153 <param name="data" value="feature_table.parquet" ftype="parquet"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
154 <param name="metadata" value="metadata.csv" ftype="csv"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
155 <param name="mode" value="batchwise"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
156 <param name="wavelet_filter" value="d"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
157 <param name="filter_length" value="2"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
158 <param name="k" value="20"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
159 <param name="t" value="0.05"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
160 <param name="t2" value="0.05"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
161 <param name="alpha" value="0"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
162 <output name="normalized_data" file="normalized_data.parquet" compare="sim_size" delta="200"/>
cf3f2f964d80 planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
recetox
parents: 5
diff changeset
163 </test>
5
fba892edb9d9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 98e541a75678eee749261630610b946c258fd5f3"
recetox
parents: 4
diff changeset
164 <!-- The following test has different results on three platform I've tried -->
fba892edb9d9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 98e541a75678eee749261630610b946c258fd5f3"
recetox
parents: 4
diff changeset
165 <!-- <test>
fba892edb9d9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 98e541a75678eee749261630610b946c258fd5f3"
recetox
parents: 4
diff changeset
166 <param name="data" value="input_data_nobatch.csv" ftype="csv"/>
fba892edb9d9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 98e541a75678eee749261630610b946c258fd5f3"
recetox
parents: 4
diff changeset
167 <param name="mode" value="single_batch"/>
fba892edb9d9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 98e541a75678eee749261630610b946c258fd5f3"
recetox
parents: 4
diff changeset
168 <param name="wavelet_filter" value="d"/>
fba892edb9d9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 98e541a75678eee749261630610b946c258fd5f3"
recetox
parents: 4
diff changeset
169 <param name="filter_length" value="2"/>
fba892edb9d9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 98e541a75678eee749261630610b946c258fd5f3"
recetox
parents: 4
diff changeset
170 <param name="k" value="20"/>
fba892edb9d9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 98e541a75678eee749261630610b946c258fd5f3"
recetox
parents: 4
diff changeset
171 <param name="alpha" value="0"/>
fba892edb9d9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 98e541a75678eee749261630610b946c258fd5f3"
recetox
parents: 4
diff changeset
172 <param name="cutoff" value="0"/>
fba892edb9d9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 98e541a75678eee749261630610b946c258fd5f3"
recetox
parents: 4
diff changeset
173 <output name="normalized_data" file="normalized_data_nobatch.tsv"/>
fba892edb9d9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 98e541a75678eee749261630610b946c258fd5f3"
recetox
parents: 4
diff changeset
174 </test> -->
fba892edb9d9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 98e541a75678eee749261630610b946c258fd5f3"
recetox
parents: 4
diff changeset
175 <test expect_failure="true">
fba892edb9d9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 98e541a75678eee749261630610b946c258fd5f3"
recetox
parents: 4
diff changeset
176 <param name="data" value="na_data.csv" ftype="csv"/>
4
8b55efc7d117 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit aa8206a01efc1813f2586584782f28a73a17fe86"
recetox
parents: 3
diff changeset
177 </test>
2
d08deef1eb44 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit e33ef984e78721ed37d825c6672795a539a461e1"
recetox
parents: 1
diff changeset
178 <test expect_failure="true">
5
fba892edb9d9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 98e541a75678eee749261630610b946c258fd5f3"
recetox
parents: 4
diff changeset
179 <param name="data" value="incomplete_metadata_data.csv" ftype="csv"/>
0
2461d20911c9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 91376ea7a6736351b0cc086ca1bc6c553fdcda97"
recetox
parents:
diff changeset
180 </test>
2461d20911c9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 91376ea7a6736351b0cc086ca1bc6c553fdcda97"
recetox
parents:
diff changeset
181 </tests>
2461d20911c9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 91376ea7a6736351b0cc086ca1bc6c553fdcda97"
recetox
parents:
diff changeset
182
5
fba892edb9d9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 98e541a75678eee749261630610b946c258fd5f3"
recetox
parents: 4
diff changeset
183 <help>
fba892edb9d9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 98e541a75678eee749261630610b946c258fd5f3"
recetox
parents: 4
diff changeset
184 <![CDATA[
fba892edb9d9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 98e541a75678eee749261630610b946c258fd5f3"
recetox
parents: 4
diff changeset
185 @HELP@
fba892edb9d9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 98e541a75678eee749261630610b946c258fd5f3"
recetox
parents: 4
diff changeset
186 ]]>
fba892edb9d9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 98e541a75678eee749261630610b946c258fd5f3"
recetox
parents: 4
diff changeset
187 </help>
0
2461d20911c9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 91376ea7a6736351b0cc086ca1bc6c553fdcda97"
recetox
parents:
diff changeset
188
2461d20911c9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 91376ea7a6736351b0cc086ca1bc6c553fdcda97"
recetox
parents:
diff changeset
189 <citations>
2461d20911c9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 91376ea7a6736351b0cc086ca1bc6c553fdcda97"
recetox
parents:
diff changeset
190 <citation type="doi">10.1016/j.aca.2019.02.010</citation>
4
8b55efc7d117 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit aa8206a01efc1813f2586584782f28a73a17fe86"
recetox
parents: 3
diff changeset
191 <citation type="doi">10.1007/s11306-021-01839-7</citation>
0
2461d20911c9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 91376ea7a6736351b0cc086ca1bc6c553fdcda97"
recetox
parents:
diff changeset
192 </citations>
2461d20911c9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 91376ea7a6736351b0cc086ca1bc6c553fdcda97"
recetox
parents:
diff changeset
193
5
fba892edb9d9 "planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 98e541a75678eee749261630610b946c258fd5f3"
recetox
parents: 4
diff changeset
194 </tool>