Mercurial > repos > rdvelazquez > hyphy_fubar

comparison macros.xml @ 7:b19b7712ab0a draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'6da8a2296bb256e47852690cf2221a7c943d8adc\n'-dirty
author rdvelazquez
date Tue, 04 Dec 2018 10:38:21 -0500
parents c21335f5d583
children 55dd19bffb00
comparison
equal deleted inserted replaced
6:c21335f5d583 7:b19b7712ab0a
16 </xml> 16 </xml>
17 <token name="@HYPHY_INVOCATION@"><![CDATA[export HYPHY=`which HYPHYMP` && 17 <token name="@HYPHY_INVOCATION@"><![CDATA[export HYPHY=`which HYPHYMP` &&
18 export HYPHY_PATH=`dirname \$HYPHY` && 18 export HYPHY_PATH=`dirname \$HYPHY` &&
19 export HYPHY_LIB=`readlink -f \$HYPHY_PATH/../lib/hyphy` && 19 export HYPHY_LIB=`readlink -f \$HYPHY_PATH/../lib/hyphy` &&
20 cat tool_params | HYPHYMP LIBPATH=\$HYPHY_LIB ]]></token> 20 cat tool_params | HYPHYMP LIBPATH=\$HYPHY_LIB ]]></token>
21 <token name="@HYPHYMPI_INVOCATION@"><![CDATA[export HYPHYMPI=`which HYPHYMPI` &&
22 export HYPHYMPI_PATH=`dirname \$HYPHYMPI` &&
23 export HYPHYMPI_LIB=`readlink -f \$HYPHYMPI_PATH/../lib/hyphy` &&
24 cat tool_params | mpirun -np \${GALAXY_SLOTS:-1} HYPHYMPI LIBPATH=\$HYPHYMPI_LIB ]]></token>
21 </macros> 25 </macros>