Mercurial > repos > rdvelazquez > hyphy_fel

annotate macros.xml @ 1:423a9dbc4e47 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'17327d46ff082448f0a0fc3b6827f5d9d6124a10\n'-dirty
author rdvelazquez
date Tue, 08 Jan 2019 11:37:55 -0500
parents f401d5910b2c
children 0317c5b940ea
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
f401d5910b2c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'17327d46ff082448f0a0fc3b6827f5d9d6124a10\n'-dirty
rdvelazquez
parents:
diff changeset
1 <?xml version="1.0"?>
f401d5910b2c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'17327d46ff082448f0a0fc3b6827f5d9d6124a10\n'-dirty
rdvelazquez
parents:
diff changeset
2 <macros>
f401d5910b2c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'17327d46ff082448f0a0fc3b6827f5d9d6124a10\n'-dirty
rdvelazquez
parents:
diff changeset
3 <xml name="citations">
f401d5910b2c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'17327d46ff082448f0a0fc3b6827f5d9d6124a10\n'-dirty
rdvelazquez
parents:
diff changeset
4 <citations>
f401d5910b2c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'17327d46ff082448f0a0fc3b6827f5d9d6124a10\n'-dirty
rdvelazquez
parents:
diff changeset
5 <citation type="doi">10.1093/bioinformatics/bti079</citation>
f401d5910b2c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'17327d46ff082448f0a0fc3b6827f5d9d6124a10\n'-dirty
rdvelazquez
parents:
diff changeset
6 <yield />
f401d5910b2c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'17327d46ff082448f0a0fc3b6827f5d9d6124a10\n'-dirty
rdvelazquez
parents:
diff changeset
7 </citations>
f401d5910b2c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'17327d46ff082448f0a0fc3b6827f5d9d6124a10\n'-dirty
rdvelazquez
parents:
diff changeset
8 </xml>
1
423a9dbc4e47 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'17327d46ff082448f0a0fc3b6827f5d9d6124a10\n'-dirty
rdvelazquez
parents: 0
diff changeset
9 <token name="@VERSION@">2.3.14</token>
0
f401d5910b2c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'17327d46ff082448f0a0fc3b6827f5d9d6124a10\n'-dirty
rdvelazquez
parents:
diff changeset
10 <xml name="requirements">
f401d5910b2c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'17327d46ff082448f0a0fc3b6827f5d9d6124a10\n'-dirty
rdvelazquez
parents:
diff changeset
11 <requirements>
f401d5910b2c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'17327d46ff082448f0a0fc3b6827f5d9d6124a10\n'-dirty
rdvelazquez
parents:
diff changeset
12 <requirement type="package" version="@VERSION@">hyphy</requirement>
f401d5910b2c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'17327d46ff082448f0a0fc3b6827f5d9d6124a10\n'-dirty
rdvelazquez
parents:
diff changeset
13 <yield />
f401d5910b2c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'17327d46ff082448f0a0fc3b6827f5d9d6124a10\n'-dirty
rdvelazquez
parents:
diff changeset
14 </requirements>
f401d5910b2c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'17327d46ff082448f0a0fc3b6827f5d9d6124a10\n'-dirty
rdvelazquez
parents:
diff changeset
15 </xml>
f401d5910b2c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'17327d46ff082448f0a0fc3b6827f5d9d6124a10\n'-dirty
rdvelazquez
parents:
diff changeset
16 <token name="@HYPHY_INVOCATION@"><![CDATA[export HYPHY=`which HYPHYMP` &&
f401d5910b2c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'17327d46ff082448f0a0fc3b6827f5d9d6124a10\n'-dirty
rdvelazquez
parents:
diff changeset
17 export HYPHY_PATH=`dirname \$HYPHY` &&
f401d5910b2c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'17327d46ff082448f0a0fc3b6827f5d9d6124a10\n'-dirty
rdvelazquez
parents:
diff changeset
18 export HYPHY_LIB=`readlink -f \$HYPHY_PATH/../lib/hyphy` &&
f401d5910b2c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'17327d46ff082448f0a0fc3b6827f5d9d6124a10\n'-dirty
rdvelazquez
parents:
diff changeset
19 cat tool_params | HYPHYMP LIBPATH=\$HYPHY_LIB ]]>
f401d5910b2c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'17327d46ff082448f0a0fc3b6827f5d9d6124a10\n'-dirty
rdvelazquez
parents:
diff changeset
20 </token>
f401d5910b2c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'17327d46ff082448f0a0fc3b6827f5d9d6124a10\n'-dirty
rdvelazquez
parents:
diff changeset
21 </macros>