Mercurial > repos > rdvelazquez > hyphy_fade

annotate macros.xml @ 0:bcd72352534f draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'8052c8a2be65f327ec2d371b6df0081e0d4674a4\n'-dirty
author rdvelazquez
date Fri, 16 Nov 2018 15:41:48 -0500
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children a7305e34418f
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bcd72352534f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'8052c8a2be65f327ec2d371b6df0081e0d4674a4\n'-dirty
rdvelazquez
parents:
diff changeset
1 <?xml version="1.0"?>
bcd72352534f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'8052c8a2be65f327ec2d371b6df0081e0d4674a4\n'-dirty
rdvelazquez
parents:
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2 <macros>
bcd72352534f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'8052c8a2be65f327ec2d371b6df0081e0d4674a4\n'-dirty
rdvelazquez
parents:
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3 <xml name="citations">
bcd72352534f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'8052c8a2be65f327ec2d371b6df0081e0d4674a4\n'-dirty
rdvelazquez
parents:
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4 <citations>
bcd72352534f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'8052c8a2be65f327ec2d371b6df0081e0d4674a4\n'-dirty
rdvelazquez
parents:
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5 <citation type="doi">10.1093/bioinformatics/bti079</citation>
bcd72352534f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'8052c8a2be65f327ec2d371b6df0081e0d4674a4\n'-dirty
rdvelazquez
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6 <yield/>
bcd72352534f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'8052c8a2be65f327ec2d371b6df0081e0d4674a4\n'-dirty
rdvelazquez
parents:
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7 </citations>
bcd72352534f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'8052c8a2be65f327ec2d371b6df0081e0d4674a4\n'-dirty
rdvelazquez
parents:
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8 </xml>
bcd72352534f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'8052c8a2be65f327ec2d371b6df0081e0d4674a4\n'-dirty
rdvelazquez
parents:
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9 <token name="@VERSION@">2.3.14</token>
bcd72352534f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'8052c8a2be65f327ec2d371b6df0081e0d4674a4\n'-dirty
rdvelazquez
parents:
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10 <xml name="requirements">
bcd72352534f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'8052c8a2be65f327ec2d371b6df0081e0d4674a4\n'-dirty
rdvelazquez
parents:
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11 <requirements>
bcd72352534f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'8052c8a2be65f327ec2d371b6df0081e0d4674a4\n'-dirty
rdvelazquez
parents:
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12 <requirement type="package" version="@VERSION@">
bcd72352534f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'8052c8a2be65f327ec2d371b6df0081e0d4674a4\n'-dirty
rdvelazquez
parents:
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13 hyphy</requirement>
bcd72352534f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'8052c8a2be65f327ec2d371b6df0081e0d4674a4\n'-dirty
rdvelazquez
parents:
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14 <yield/>
bcd72352534f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'8052c8a2be65f327ec2d371b6df0081e0d4674a4\n'-dirty
rdvelazquez
parents:
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15 </requirements>
bcd72352534f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'8052c8a2be65f327ec2d371b6df0081e0d4674a4\n'-dirty
rdvelazquez
parents:
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16 </xml>
bcd72352534f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'8052c8a2be65f327ec2d371b6df0081e0d4674a4\n'-dirty
rdvelazquez
parents:
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17 <token name="@HYPHY_INVOCATION@"><![CDATA[export HYPHY=`which HYPHYMP` &&
bcd72352534f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'8052c8a2be65f327ec2d371b6df0081e0d4674a4\n'-dirty
rdvelazquez
parents:
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18 export HYPHY_PATH=`dirname \$HYPHY` &&
bcd72352534f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'8052c8a2be65f327ec2d371b6df0081e0d4674a4\n'-dirty
rdvelazquez
parents:
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19 export HYPHY_LIB=`readlink -f \$HYPHY_PATH/../lib/hyphy` &&
bcd72352534f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'8052c8a2be65f327ec2d371b6df0081e0d4674a4\n'-dirty
rdvelazquez
parents:
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20 cat tool_params | HYPHYMP LIBPATH=\$HYPHY_LIB ]]></token>
bcd72352534f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'8052c8a2be65f327ec2d371b6df0081e0d4674a4\n'-dirty
rdvelazquez
parents:
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21 </macros>