annotate macros.xml @ 2:d61d01c0af4c draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'bff24ad0eccc4083de076adc029c5c3ac50e2852\n'-dirty
author rdvelazquez
date Mon, 19 Nov 2018 14:26:45 -0500
parents b0c0b8612ed2
children 5ec23e080e4f
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
9e8344d39fb7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'242b3b04d9e05475977bc6def0dd5e5e9fe4380d\n'-dirty
rdvelazquez
parents:
diff changeset
1 <?xml version="1.0"?>
9e8344d39fb7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'242b3b04d9e05475977bc6def0dd5e5e9fe4380d\n'-dirty
rdvelazquez
parents:
diff changeset
2 <macros>
1
b0c0b8612ed2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'bff24ad0eccc4083de076adc029c5c3ac50e2852\n'-dirty
rdvelazquez
parents: 0
diff changeset
3 <xml name="citations">
b0c0b8612ed2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'bff24ad0eccc4083de076adc029c5c3ac50e2852\n'-dirty
rdvelazquez
parents: 0
diff changeset
4 <citations>
b0c0b8612ed2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'bff24ad0eccc4083de076adc029c5c3ac50e2852\n'-dirty
rdvelazquez
parents: 0
diff changeset
5 <citation type="doi">10.1093/bioinformatics/bti079</citation>
b0c0b8612ed2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'bff24ad0eccc4083de076adc029c5c3ac50e2852\n'-dirty
rdvelazquez
parents: 0
diff changeset
6 <yield/>
b0c0b8612ed2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'bff24ad0eccc4083de076adc029c5c3ac50e2852\n'-dirty
rdvelazquez
parents: 0
diff changeset
7 </citations>
b0c0b8612ed2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'bff24ad0eccc4083de076adc029c5c3ac50e2852\n'-dirty
rdvelazquez
parents: 0
diff changeset
8 </xml>
b0c0b8612ed2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'bff24ad0eccc4083de076adc029c5c3ac50e2852\n'-dirty
rdvelazquez
parents: 0
diff changeset
9 <token name="@VERSION@">2.3.14</token>
b0c0b8612ed2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'bff24ad0eccc4083de076adc029c5c3ac50e2852\n'-dirty
rdvelazquez
parents: 0
diff changeset
10 <xml name="requirements">
b0c0b8612ed2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'bff24ad0eccc4083de076adc029c5c3ac50e2852\n'-dirty
rdvelazquez
parents: 0
diff changeset
11 <requirements>
b0c0b8612ed2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'bff24ad0eccc4083de076adc029c5c3ac50e2852\n'-dirty
rdvelazquez
parents: 0
diff changeset
12 <requirement type="package" version="@VERSION@">
b0c0b8612ed2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'bff24ad0eccc4083de076adc029c5c3ac50e2852\n'-dirty
rdvelazquez
parents: 0
diff changeset
13 hyphy</requirement>
b0c0b8612ed2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'bff24ad0eccc4083de076adc029c5c3ac50e2852\n'-dirty
rdvelazquez
parents: 0
diff changeset
14 <yield/>
b0c0b8612ed2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'bff24ad0eccc4083de076adc029c5c3ac50e2852\n'-dirty
rdvelazquez
parents: 0
diff changeset
15 </requirements>
b0c0b8612ed2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'bff24ad0eccc4083de076adc029c5c3ac50e2852\n'-dirty
rdvelazquez
parents: 0
diff changeset
16 </xml>
b0c0b8612ed2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'bff24ad0eccc4083de076adc029c5c3ac50e2852\n'-dirty
rdvelazquez
parents: 0
diff changeset
17 <token name="@HYPHY_INVOCATION@"><![CDATA[export HYPHY=`which HYPHYMP` &&
0
9e8344d39fb7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'242b3b04d9e05475977bc6def0dd5e5e9fe4380d\n'-dirty
rdvelazquez
parents:
diff changeset
18 export HYPHY_PATH=`dirname \$HYPHY` &&
9e8344d39fb7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'242b3b04d9e05475977bc6def0dd5e5e9fe4380d\n'-dirty
rdvelazquez
parents:
diff changeset
19 export HYPHY_LIB=`readlink -f \$HYPHY_PATH/../lib/hyphy` &&
1
b0c0b8612ed2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'bff24ad0eccc4083de076adc029c5c3ac50e2852\n'-dirty
rdvelazquez
parents: 0
diff changeset
20 cat tool_params | HYPHYMP LIBPATH=\$HYPHY_LIB ]]></token>
b0c0b8612ed2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'bff24ad0eccc4083de076adc029c5c3ac50e2852\n'-dirty
rdvelazquez
parents: 0
diff changeset
21 </macros>