Mercurial > repos > rdvelazquez > hyphy_absrel

annotate macros.xml @ 0:9e8344d39fb7 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'242b3b04d9e05475977bc6def0dd5e5e9fe4380d\n'-dirty
author rdvelazquez
date Mon, 10 Sep 2018 12:02:49 -0400
parents
children b0c0b8612ed2
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
9e8344d39fb7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'242b3b04d9e05475977bc6def0dd5e5e9fe4380d\n'-dirty
rdvelazquez
parents:
diff changeset
1 <?xml version="1.0"?>
9e8344d39fb7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'242b3b04d9e05475977bc6def0dd5e5e9fe4380d\n'-dirty
rdvelazquez
parents:
diff changeset
2 <macros>
9e8344d39fb7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'242b3b04d9e05475977bc6def0dd5e5e9fe4380d\n'-dirty
rdvelazquez
parents:
diff changeset
3 <xml name="citations">
9e8344d39fb7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'242b3b04d9e05475977bc6def0dd5e5e9fe4380d\n'-dirty
rdvelazquez
parents:
diff changeset
4 <citations>
9e8344d39fb7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'242b3b04d9e05475977bc6def0dd5e5e9fe4380d\n'-dirty
rdvelazquez
parents:
diff changeset
5 <citation type="doi">10.1093/bioinformatics/bti079</citation>
9e8344d39fb7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'242b3b04d9e05475977bc6def0dd5e5e9fe4380d\n'-dirty
rdvelazquez
parents:
diff changeset
6 <yield />
9e8344d39fb7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'242b3b04d9e05475977bc6def0dd5e5e9fe4380d\n'-dirty
rdvelazquez
parents:
diff changeset
7 </citations>
9e8344d39fb7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'242b3b04d9e05475977bc6def0dd5e5e9fe4380d\n'-dirty
rdvelazquez
parents:
diff changeset
8 </xml>
9e8344d39fb7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'242b3b04d9e05475977bc6def0dd5e5e9fe4380d\n'-dirty
rdvelazquez
parents:
diff changeset
9 <token name="@VERSION@">2.3.12</token>
9e8344d39fb7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'242b3b04d9e05475977bc6def0dd5e5e9fe4380d\n'-dirty
rdvelazquez
parents:
diff changeset
10 <xml name="requirements">
9e8344d39fb7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'242b3b04d9e05475977bc6def0dd5e5e9fe4380d\n'-dirty
rdvelazquez
parents:
diff changeset
11 <requirements>
9e8344d39fb7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'242b3b04d9e05475977bc6def0dd5e5e9fe4380d\n'-dirty
rdvelazquez
parents:
diff changeset
12 <requirement type="package" version="@VERSION@">hyphy</requirement>
9e8344d39fb7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'242b3b04d9e05475977bc6def0dd5e5e9fe4380d\n'-dirty
rdvelazquez
parents:
diff changeset
13 <yield />
9e8344d39fb7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'242b3b04d9e05475977bc6def0dd5e5e9fe4380d\n'-dirty
rdvelazquez
parents:
diff changeset
14 </requirements>
9e8344d39fb7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'242b3b04d9e05475977bc6def0dd5e5e9fe4380d\n'-dirty
rdvelazquez
parents:
diff changeset
15 </xml>
9e8344d39fb7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'242b3b04d9e05475977bc6def0dd5e5e9fe4380d\n'-dirty
rdvelazquez
parents:
diff changeset
16 <token name="@HYPHY_INVOCATION@"><![CDATA[export HYPHY=`which HYPHYMP` &&
9e8344d39fb7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'242b3b04d9e05475977bc6def0dd5e5e9fe4380d\n'-dirty
rdvelazquez
parents:
diff changeset
17 export HYPHY_PATH=`dirname \$HYPHY` &&
9e8344d39fb7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'242b3b04d9e05475977bc6def0dd5e5e9fe4380d\n'-dirty
rdvelazquez
parents:
diff changeset
18 export HYPHY_LIB=`readlink -f \$HYPHY_PATH/../lib/hyphy` &&
9e8344d39fb7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'242b3b04d9e05475977bc6def0dd5e5e9fe4380d\n'-dirty
rdvelazquez
parents:
diff changeset
19 cat tool_params | HYPHYMP LIBPATH=\$HYPHY_LIB ]]>
9e8344d39fb7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'242b3b04d9e05475977bc6def0dd5e5e9fe4380d\n'-dirty
rdvelazquez
parents:
diff changeset
20 </token>
9e8344d39fb7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'242b3b04d9e05475977bc6def0dd5e5e9fe4380d\n'-dirty
rdvelazquez
parents:
diff changeset
21 </macros>