Mercurial > repos > proteore > proteore_maps_visualization

changeset 11:7d04efde2526 draft

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"planemo upload commit 1f9a98db2496834cc38a281cbe3d4b11de2bc3d2-dirty"
author proteore
date Thu, 05 Mar 2020 13:45:08 +0000
parents a4db9efe1e43
children 10c572ad2b9e
files kegg_maps_visualization.R kegg_maps_visualization.xml
diffstat 2 files changed, 3 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- a/kegg_maps_visualization.R	Mon Mar 02 09:23:05 2020 +0000
+++ b/kegg_maps_visualization.R	Thu Mar 05 13:45:08 2020 +0000
@@ -172,8 +172,8 @@
 }
 
 get_limit <- function(mat) {
-  min = min(apply(mat,2,min))
-  max = max(apply(mat,2,max))
+  min = min(apply(mat,2,min,na.rm=TRUE))
+  max = max(apply(mat,2,max,na.rm=TRUE))
   return(c(min,max))
 }
 
--- a/kegg_maps_visualization.xml	Mon Mar 02 09:23:05 2020 +0000
+++ b/kegg_maps_visualization.xml	Thu Mar 05 13:45:08 2020 +0000
@@ -1,4 +1,4 @@
-<tool id="kegg_maps_visualization" name="KEGG pathways mapping and visualization" version="2020.03.02">
+<tool id="kegg_maps_visualization" name="KEGG pathways mapping and visualization" version="2020.03.05">
     <description>[PathView]</description>
     <requirements>
         <requirement type="package" version="3.6.2" >R</requirement>