Mercurial > repos > proteore > proteore_expression_rnaseq_abbased

diff add_expression_HPA.R @ 9:28d51adf8292 draft

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"planemo upload commit 330a2527c7e20c4d189a0f1b7a184a8c4610b4b6-dirty"
author proteore
date Wed, 22 Jan 2020 15:20:35 +0000
parents fda784211e3a
children 07858c6dbbff
line wrap: on
line diff
--- a/add_expression_HPA.R	Wed Jan 22 15:11:58 2020 +0000
+++ b/add_expression_HPA.R	Wed Jan 22 15:20:35 2020 +0000
@@ -175,7 +175,8 @@
   check_ensembl_geneids(ids)
 
   # Read protein atlas
-  protein_atlas = read_file(args$atlas, T)
+  protein_atlas = args$atlas
+  protein_atlas = read_file(protein_atlas, T)
 
   # Add expression
   output = args$output