Mercurial > repos > proteore > proteore_expression_levels_by_tissue

changeset 5:b5be6d94f2a1 draft

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planemo upload commit 0290724216a2c445b4e28842153b84a1b28f4e9a-dirty
author proteore
date Thu, 16 May 2019 11:12:56 -0400
parents 5cd79aa7aac9
children 1c3a5ceab3cd
files get_expression_profiles.xml proteore_protein_atlas_normal_tissue.loc.sample proteore_protein_atlas_tumor_tissue.loc.sample tool_data_table_conf.xml.sample
diffstat 4 files changed, 7 insertions(+), 7 deletions(-) [+]
line wrap: on
line diff
--- a/get_expression_profiles.xml	Mon May 13 11:45:29 2019 -0400
+++ b/get_expression_profiles.xml	Thu May 16 11:12:56 2019 -0400
@@ -1,4 +1,4 @@
-<tool id="sel_ann_hpa" name="Get expression profiles" version="2019.03.13">
+<tool id="sel_ann_hpa" name="Get expression profiles" version="2019.05.16">
     <description>by (normal or tumor) tissue/cell type [Human Protein Atlas]
     </description>
     <requirements>
--- a/proteore_protein_atlas_normal_tissue.loc.sample	Mon May 13 11:45:29 2019 -0400
+++ b/proteore_protein_atlas_normal_tissue.loc.sample	Thu May 16 11:12:56 2019 -0400
@@ -1,2 +1,2 @@
-#<id>	<name>	<tissue>	<value>
-HPA_normal_tissue_23-10-2018	HPA normal tissue 23/10/2018	HPA_normal_tissue	/tool-data/HPA_normal_tissue_23-10-2018.tsv
+#<id>	<release>	<name>	<tissue>	<value>
+9979818977	HPA_normal_tissue_23-10-2018	HPA normal tissue 23/10/2018	HPA_normal_tissue	/tool-data/HPA_normal_tissue_23-10-2018.tsv
--- a/proteore_protein_atlas_tumor_tissue.loc.sample	Mon May 13 11:45:29 2019 -0400
+++ b/proteore_protein_atlas_tumor_tissue.loc.sample	Thu May 16 11:12:56 2019 -0400
@@ -1,2 +1,2 @@
-#<id>	<name>	<tissue>	<value>
-HPA_pathology_23-10-2018	HPA pathology 23/10/2018	HPA_pathology	/tool-data/HPA_pathology_23-10-2018.tsv
+#<id>	<release>	<name>	<tissue>	<value>
+9979818977	HPA_pathology_23-10-2018	HPA pathology 23/10/2018	HPA_pathology	/tool-data/HPA_pathology_23-10-2018.tsv
--- a/tool_data_table_conf.xml.sample	Mon May 13 11:45:29 2019 -0400
+++ b/tool_data_table_conf.xml.sample	Thu May 16 11:12:56 2019 -0400
@@ -1,10 +1,10 @@
 <tables>
     <table name="proteore_protein_atlas_normal_tissue" comment_char="#">
-      <columns>id, name, tissue, value</columns>
+      <columns>id, release, name, tissue, value</columns>
       <file path="tool-data/proteore_protein_atlas_normal_tissue.loc" />
     </table>
     <table name="proteore_protein_atlas_tumor_tissue" comment_char="#">
-      <columns>id, name, tissue, value</columns>
+      <columns>id, release, name, tissue, value</columns>
       <file path="tool-data/proteore_protein_atlas_tumor_tissue.loc" />
     </table>
 </tables>
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