changeset 16:f75c525e0a4a draft

planemo upload commit 04868e380c43447fac1309fc292785d67863a87b-dirty
author proteore
date Thu, 02 May 2019 09:04:06 -0400
parents 5f39d3ef5fe3
children e785cc7f1ac0
files data_manager/resource_building.py data_manager/resource_building.xml
diffstat 2 files changed, 3 insertions(+), 6 deletions(-) [+]
line wrap: on
line diff
--- a/data_manager/resource_building.py	Wed Apr 17 10:33:31 2019 -0400
+++ b/data_manager/resource_building.py	Thu May 02 09:04:06 2019 -0400
@@ -505,13 +505,10 @@
     output_file = 'nextprot_ref_'+ time.strftime("%d-%m-%Y") + ".tsv"
     path = os.path.join(target_directory,output_file)
     name = "neXtProt release "+time.strftime("%d-%m-%Y")
-    id = "nextprot_ref_"+time.strftime("%d-%m-%Y")
-    
+    release_id = "nextprot_ref_"+time.strftime("%d-%m-%Y")
     
     output = open(path, 'w')
     writer = csv.writer(output,delimiter="\t")
-    
-    
         
     nextprot_file=[["NextprotID","MW","SeqLength","IsoPoint","Chr","SubcellLocations","Diseases","TMDomains","ProteinExistence"]]
     writer.writerows(nextprot_file)
@@ -566,7 +563,7 @@
         nextprot_file.append([id,mass_mol,str(seq_length),iso_elec_point,chr_loc,all_subcell_locs,all_diseases,str(nb_domains),protein_existence])
         writer.writerows(nextprot_file)
 
-    data_table_entry = dict(id=id, name = name, value = path)
+    data_table_entry = dict(id=release_id, name = name, value = path)
     _add_data_table_entry(data_manager_dict, data_table_entry, "proteore_nextprot_ref")
 
 #######################################################################################################
--- a/data_manager/resource_building.xml	Wed Apr 17 10:33:31 2019 -0400
+++ b/data_manager/resource_building.xml	Thu May 02 09:04:06 2019 -0400
@@ -1,4 +1,4 @@
-<tool id="data_manager_proteore" name="Get source files for proteore tools" version="2019.04.17" tool_type="manage_data">
+<tool id="data_manager_proteore" name="Get source files for proteore tools" version="2019.05.01" tool_type="manage_data">
 <description>
 to create or update reference files for proteore tools
 </description>