Mercurial > repos > proteore > proteore_data_manager
changeset 27:9a400ce8e4e6 draft
planemo upload commit bb113d19d3a756f70784e6a1433902888686ed96-dirty
| author | proteore |
|---|---|
| date | Fri, 17 May 2019 04:09:47 -0400 |
| parents | bf6940ff60a8 |
| children | 808c8493ed4f |
| files | data_manager/resource_building.py data_manager/resource_building.xml tool-data/proteore_biogrid_dictionaries.loc.sample tool-data/proteore_bioplex_dictionaries.loc.sample tool-data/proteore_humap_dictionaries.loc.sample |
| diffstat | 5 files changed, 8 insertions(+), 8 deletions(-) [+] |
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--- a/data_manager/resource_building.py Thu May 16 07:29:01 2019 -0400 +++ b/data_manager/resource_building.py Fri May 17 04:09:47 2019 -0400 @@ -499,10 +499,10 @@ dico['protein_name']=dico_protein_name #writing output - output_file = species+'_'+interactome+'_'+ time.strftime("%d-%m-%Y") + ".json" + output_file = species+'_'+interactome+'_'+ time.strftime("%Y-%m-%d") + ".json" path = os.path.join(target_directory,output_file) name = species+" ("+species_dict[species]+") "+time.strftime("%d/%m/%Y") - release = species+"_"+interactome+"_"+ time.strftime("%d-%m-%Y") + release = species+"_"+interactome+"_"+ time.strftime("%Y-%m-%d") id = str(10000000000 - int(time.strftime("%Y%m%d"))) with open(path, 'w') as handle:
--- a/data_manager/resource_building.xml Thu May 16 07:29:01 2019 -0400 +++ b/data_manager/resource_building.xml Fri May 17 04:09:47 2019 -0400 @@ -1,4 +1,4 @@ -<tool id="data_manager_proteore" name="Get source files for proteore tools" version="2019.05.16" tool_type="manage_data"> +<tool id="data_manager_proteore" name="Get source files for proteore tools" version="2019.05.17" tool_type="manage_data"> <description> to create or update reference files for proteore tools </description>
--- a/tool-data/proteore_biogrid_dictionaries.loc.sample Thu May 16 07:29:01 2019 -0400 +++ b/tool-data/proteore_biogrid_dictionaries.loc.sample Fri May 17 04:09:47 2019 -0400 @@ -1,4 +1,4 @@ #id release name species value -#9979809892 biogrid_human_08-01-2019 Human (Homo sapiens) 08/01/2019 Human PPI_dictionaries/Human_biogrid.json -#9979809892 biogrid_mouse_08-01-2019 Mouse (Mus musculus) 08/01/2019 Mouse PPI_dictionaries/Mouse_biogrid.json -#9979809892 biogrid_rat_08-01-2019 Rat (Rattus norvegicus) 08/01/2019 Rat PPI_dictionaries/Rat_biogrid.json +#9979809892 biogrid_human_2019-01-08 Human (Homo sapiens) 08/01/2019 Human PPI_dictionaries/Human_biogrid.json +#9979809892 biogrid_mouse_2019-01-08 Mouse (Mus musculus) 08/01/2019 Mouse PPI_dictionaries/Mouse_biogrid.json +#9979809892 biogrid_rat_2019-01-08 Rat (Rattus norvegicus) 08/01/2019 Rat PPI_dictionaries/Rat_biogrid.json
--- a/tool-data/proteore_bioplex_dictionaries.loc.sample Thu May 16 07:29:01 2019 -0400 +++ b/tool-data/proteore_bioplex_dictionaries.loc.sample Fri May 17 04:09:47 2019 -0400 @@ -1,2 +1,2 @@ #id release name species value -#9979809892 bioplex_human_08-01-2019 Human (Homo sapiens) 08/01/2019 Human PPI_dictionaries/human_bioplex.json +#9979809892 bioplex_human_2019-01-08 Human (Homo sapiens) 08/01/2019 Human PPI_dictionaries/human_bioplex.json
--- a/tool-data/proteore_humap_dictionaries.loc.sample Thu May 16 07:29:01 2019 -0400 +++ b/tool-data/proteore_humap_dictionaries.loc.sample Fri May 17 04:09:47 2019 -0400 @@ -1,2 +1,2 @@ #id release name species value -#9979809799 humap_human_01-02-2019 Human (Homo sapiens) 01/02/19 Human PPI_dictionaries/Human_humap_01-02-2019.json +#9979809799 humap_human_2019-01-02 Human (Homo sapiens) 01/02/19 Human PPI_dictionaries/Human_humap_01-02-2019.json