Mercurial > repos > proteore > proteore_data_manager

changeset 5:429e7481c392 draft

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planemo upload commit 51fc514a85c1055cab5bb6e76c90f3da7e648101-dirty
author proteore
date Fri, 08 Mar 2019 04:09:43 -0500
parents ce01295cd601
children f281a1eb83d6
files data_manager/resource_building.py data_manager/resource_building.xml
diffstat 2 files changed, 3 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- a/data_manager/resource_building.py	Fri Mar 08 04:03:51 2019 -0500
+++ b/data_manager/resource_building.py	Fri Mar 08 04:09:43 2019 -0500
@@ -452,9 +452,9 @@
 
                 #second interactant (second column)
                 if line[1] not in dico_network:
-                    dico_network[line[1]]=[line[1]+line[0]+[interactant_B,interactant_A,line[2]]]
+                    dico_network[line[1]]=[[line[1],line[0],interactant_B,interactant_A,line[2]]]
                 else :
-                    dico_network[line[1]].append(line[1]+line[0]+[interactant_B,interactant_A,line[2]])
+                    dico_network[line[1]].append([line[1],line[0],interactant_B,interactant_A,line[2]])
 
         with requests.Session() as s:
             r = s.get('https://www.reactome.org/download/current/NCBI2Reactome.txt')
--- a/data_manager/resource_building.xml	Fri Mar 08 04:03:51 2019 -0500
+++ b/data_manager/resource_building.xml	Fri Mar 08 04:09:43 2019 -0500
@@ -1,4 +1,4 @@
-<tool id="data_manager_proteore" name="Get source files for proteore tools" version="2019.03.08" tool_type="manage_data">
+<tool id="data_manager_proteore" name="Get source files for proteore tools" version="2019.03.08.1" tool_type="manage_data">
 <description>
 to create or update reference files for proteore tools
 </description>