Mercurial > repos > proteore > proteore_data_manager

comparison data_manager_conf.xml @ 46:e09edc8b1c90 draft

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"planemo upload commit 6bef056b0e52bfa39dbe8591bfe67f8c95bf3ba2-dirty"
author proteore
date Tue, 21 Jan 2020 16:18:05 +0000
parents bf6940ff60a8
children 09d9fd9b2d8c
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45:488e015576bc 46:e09edc8b1c90
30 <value_translation type="function">abspath</value_translation> 30 <value_translation type="function">abspath</value_translation>
31 </column> 31 </column>
32 </output> 32 </output>
33 </data_table> 33 </data_table>
34 <data_table name="proteore_protein_atlas_tumor_tissue"> 34 <data_table name="proteore_protein_atlas_tumor_tissue">
35 <output>
36 <column name="id"/>
37 <column name="release"/>
38 <column name="name" />
39 <column name="tissue" />
40 <column name="value" output_ref="output" >
41 <move type="file">
42 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">protein_atlas/</target>
43 </move>
44 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/protein_atlas/${release}.tsv</value_translation>
45 <value_translation type="function">abspath</value_translation>
46 </column>
47 </output>
48 </data_table>
49 <data_table name="proteore_protein_full_atlas">
35 <output> 50 <output>
36 <column name="id"/> 51 <column name="id"/>
37 <column name="release"/> 52 <column name="release"/>
38 <column name="name" /> 53 <column name="name" />
39 <column name="tissue" /> 54 <column name="tissue" />