Mercurial > repos > proteore > proteore_data_manager

diff data_manager_conf.xml @ 46:e09edc8b1c90 draft

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"planemo upload commit 6bef056b0e52bfa39dbe8591bfe67f8c95bf3ba2-dirty"
author proteore
date Tue, 21 Jan 2020 16:18:05 +0000
parents bf6940ff60a8
children 09d9fd9b2d8c
line wrap: on
line diff
--- a/data_manager_conf.xml	Wed Jan 08 15:15:16 2020 +0000
+++ b/data_manager_conf.xml	Tue Jan 21 16:18:05 2020 +0000
@@ -46,6 +46,21 @@
                 </column>
             </output>
         </data_table>
+        <data_table name="proteore_protein_full_atlas">
+            <output>
+                <column name="id"/>
+                <column name="release"/>
+                <column name="name" />
+                <column name="tissue" />
+                <column name="value" output_ref="output" >
+                    <move type="file">
+                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">protein_atlas/</target>
+                    </move>
+                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/protein_atlas/${release}.tsv</value_translation>
+                    <value_translation type="function">abspath</value_translation>
+                </column>
+            </output>
+        </data_table>
         <data_table name="proteore_id_mapping_Human">
             <output>
                 <column name="id" />