Mercurial > repos > proteore > proteore_clusterprofiler

diff GO-enrich.R @ 24:267ee3760721 draft

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planemo upload commit a1f29af18fb9b5164846c59c9e0462227a0dd5d9-dirty
author proteore
date Tue, 06 Nov 2018 03:56:00 -0500
parents 879367568ea6
children 3a66e1e65c02
line wrap: on
line diff
--- a/GO-enrich.R	Fri Oct 05 09:16:47 2018 -0400
+++ b/GO-enrich.R	Tue Nov 06 03:56:00 2018 -0500
@@ -201,8 +201,7 @@
   } else if (id_type=="Entrez" & any(check_ids(input,"entrez"))) {
     gene<-unique(input)
   } else {
-    print(paste(id_type,"not found in your ids list, please check your IDs in input or the selected column of your input file"))
-    stop()
+    stop(paste(id_type,"not found in your ids list, please check your IDs in input or the selected column of your input file"))
   }
 
   ontology <- strsplit(args$onto_opt, ",")[[1]]