Mercurial > repos > proteore > proteore_clusterprofiler

comparison cluster_profiler.xml @ 13:1d6095094e5f draft

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planemo upload commit 3305e0bef3621ca618b08e9f2fa79e55ecd11595-dirty
author proteore
date Tue, 25 Sep 2018 08:58:30 -0400
parents 7a5814f0392a
children 0e3ac8fc061c
comparison
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12:7a5814f0392a 13:1d6095094e5f
1 <tool id="cluter_profiler" name="clusterProfiler" version="2018.09.25.2"> 1 <tool id="cluter_profiler" name="clusterProfiler" version="2018.09.25.3">
2 <description> 2 <description>
3 GO terms classification and enrichment analysis 3 GO terms classification and enrichment analysis
4 </description> 4 </description>
5 <requirements> 5 <requirements>
6 <requirement type="package" version="3.4.1">R</requirement> 6 <requirement type="package" version="3.4.1">R</requirement>
7 <requirement type="package" version="3.5.0">bioconductor-org.hs.eg.db</requirement> 7 <requirement type="package" version="3.5.0">bioconductor-org.hs.eg.db</requirement>
8 <requirement type="package" version="3.5.0">bioconductor-org.mm.eg.db</requirement> 8 <requirement type="package" version="3.5.0">bioconductor-org.mm.eg.db</requirement>
9 <requirement type="package" version="3.5.0">bioconductor-org.rn.eg.db</requirement> 9 <requirement type="package" version="3.5.0">bioconductor-org.rn.eg.db</requirement>
10 <requirement type="package" version="3.4.0">bioconductor-dose</requirement> 10 <requirement type="package" version="3.4.0">bioconductor-dose</requirement>
11 <requirement type="package" version="3.4.4">bioconductor-clusterprofiler</requirement> 11 <requirement type="package" version="3.6.0">bioconductor-clusterprofiler</requirement>
12 </requirements> 12 </requirements>
13 <command detect_errors="exit_code"><![CDATA[ 13 <command detect_errors="exit_code"><![CDATA[
14 Rscript "$__tool_directory__/GO-enrich.R" 14 Rscript "$__tool_directory__/GO-enrich.R"
15 #if $input.ids == "text" 15 #if $input.ids == "text"
16 --input_type="text" 16 --input_type="text"