Mercurial > repos > proteore > proteore_build_protein_interaction_maps
changeset 3:2f6cf63f8604 draft
planemo upload commit 71363136045353f422ff98219c1eb84f6fc6193a-dirty
| author | proteore |
|---|---|
| date | Tue, 12 Mar 2019 06:56:01 -0400 |
| parents | bb244c1eaef2 |
| children | ed85511368e0 |
| files | build_protein_interaction_maps.py build_protein_interaction_maps.xml |
| diffstat | 2 files changed, 2 insertions(+), 2 deletions(-) [+] |
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--- a/build_protein_interaction_maps.py Tue Mar 12 06:52:40 2019 -0400 +++ b/build_protein_interaction_maps.py Tue Mar 12 06:56:01 2019 -0400 @@ -161,7 +161,7 @@ else : ids_not_found.add(id) - nodes_file = [["Entrez gene ID","Official Symbol Interactor","Present in user input ids","ID present in Hu.MAP","Pathway","Protein name"]] + nodes_file = [["Entrez gene ID","Official Symbol Interactor","Present in user input ids","ID present in Hu.MAP","Protein name","Pathway"]] for id in ids_set: if id in ppi_dict['nodes']: description_pathway=";".join(ppi_dict['nodes'][id])
--- a/build_protein_interaction_maps.xml Tue Mar 12 06:52:40 2019 -0400 +++ b/build_protein_interaction_maps.xml Tue Mar 12 06:56:01 2019 -0400 @@ -1,4 +1,4 @@ -<tool id="build_protein_interaction_maps" name="Build Protein-Protein interaction network" version="2019.03.12.1"> +<tool id="build_protein_interaction_maps" name="Build Protein-Protein interaction network" version="2019.03.12.2"> <description>[BioGRID, BioPlex, HuMAP]</description> <requirements> </requirements>