Mercurial > repos > pjbriggs > weeder2
view tool-data/weeder2.loc.sample @ 0:fb7e680232af draft
Uploaded v2.0.2
author | pjbriggs |
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date | Mon, 05 Mar 2018 06:21:11 -0500 |
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# This is a sample file distributed with Galaxy that is used by the # weeder2 tool to find the frequency files. # # The weeder.loc file has this format (white space characters are TAB # characters): # #<species_code> <Description> <PathToFreqFilesDir> # # <PathToFreqFilesDir> should be a period ('.') to indicate the # frequency files that come as standard with weeder2; otherwise # it should be the full path to the directory holding a custom # set of .freq files. # # For example: # #AF Aspergillus fumigatus (AF) /home/galaxy/weeder/FreqFiles # # where '/home/galaxy/weeder/FreqFiles' would contain: # #-rw-rw-r-- 1 pjb pjb 20109718 Oct 23 13:16 AF_ds.10.freq #-rw-rw-r-- 1 pjb pjb 47080 Oct 23 13:15 AF_ds.6.freq #-rw-rw-r-- 1 pjb pjb 1006374 Oct 23 13:15 AF_ds.8.freq #-rw-rw-r-- 1 pjb pjb 19930169 Oct 23 13:16 AF_ss.10.freq #-rw-rw-r-- 1 pjb pjb 45262 Oct 23 13:16 AF_ss.6.freq #-rw-rw-r-- 1 pjb pjb 984583 Oct 23 13:16 AF_ss.8.freq # # Entries are already provided for the standard frequency files that # are distributed with Weeder2. # This file should be placed in galaxy's tool-data directory when the # weeder2 tool is installed. HS Homo sapiens (HS) . MM Mus musculus (MM) . DM Drosophila melanogaster (DM) . SC Saccharomyces cerevisiae (SC) . AT Arabidopsis thaliana (AT) .