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comparison tool-data/weeder2.loc.sample @ 0:fb7e680232af draft

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Uploaded v2.0.2
author pjbriggs
date Mon, 05 Mar 2018 06:21:11 -0500
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-1:000000000000 0:fb7e680232af
1 # This is a sample file distributed with Galaxy that is used by the
2 # weeder2 tool to find the frequency files.
3 #
4 # The weeder.loc file has this format (white space characters are TAB
5 # characters):
6 #
7 #<species_code> <Description> <PathToFreqFilesDir>
8 #
9 # <PathToFreqFilesDir> should be a period ('.') to indicate the
10 # frequency files that come as standard with weeder2; otherwise
11 # it should be the full path to the directory holding a custom
12 # set of .freq files.
13 #
14 # For example:
15 #
16 #AF Aspergillus fumigatus (AF) /home/galaxy/weeder/FreqFiles
17 #
18 # where '/home/galaxy/weeder/FreqFiles' would contain:
19 #
20 #-rw-rw-r-- 1 pjb pjb 20109718 Oct 23 13:16 AF_ds.10.freq
21 #-rw-rw-r-- 1 pjb pjb 47080 Oct 23 13:15 AF_ds.6.freq
22 #-rw-rw-r-- 1 pjb pjb 1006374 Oct 23 13:15 AF_ds.8.freq
23 #-rw-rw-r-- 1 pjb pjb 19930169 Oct 23 13:16 AF_ss.10.freq
24 #-rw-rw-r-- 1 pjb pjb 45262 Oct 23 13:16 AF_ss.6.freq
25 #-rw-rw-r-- 1 pjb pjb 984583 Oct 23 13:16 AF_ss.8.freq
26 #
27 # Entries are already provided for the standard frequency files that
28 # are distributed with Weeder2.
29 # This file should be placed in galaxy's tool-data directory when the
30 # weeder2 tool is installed.
31 HS Homo sapiens (HS) .
32 MM Mus musculus (MM) .
33 DM Drosophila melanogaster (DM) .
34 SC Saccharomyces cerevisiae (SC) .
35 AT Arabidopsis thaliana (AT) .