Mercurial > repos > pjbriggs > macs21

diff tool_dependencies.xml @ 0:fdad0c8c0957 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded initial version to test toolshed.
author pjbriggs
date Wed, 21 Jan 2015 11:07:37 -0500
parents
children d0986d2be693
line wrap: on
line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Wed Jan 21 11:07:37 2015 -0500
@@ -0,0 +1,34 @@
+<?xml version="1.0"?>
+<tool_dependency>
+  <package name="python" version="2.7">
+    <repository changeset_revision="74d009a2a4cb" name="package_python_2_7" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  </package>
+  <package name="numpy" version="1.8.1">
+    <repository changeset_revision="0f9f634dec8a" name="package_numpy_1_8" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  </package>
+  <package name="macs2" version="2.1.0.20140616">
+      <install version="1.0">
+            <actions>
+              <action type="download_by_url">https://pypi.python.org/packages/source/M/MACS2/MACS2-2.1.0.20140616.tar.gz</action>
+              <action type="set_environment_for_install">
+		<repository changeset_revision="74d009a2a4cb" name="package_python_2_7" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
+		  <package name="python" version="2.7" />
+		</repository>
+		<repository changeset_revision="0f9f634dec8a" name="package_numpy_1_8" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
+		  <package name="numpy" version="1.8.1" />
+		</repository>
+	      </action>
+              <action type="make_directory">$INSTALL_DIR/lib/python</action>
+              <action type="shell_command">
+                export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp; 
+                python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin
+              </action>
+              <action type="set_environment">
+                <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable>
+                <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
+              </action>
+            </actions>
+      </install>
+      <readme>Macs2.1 depends on having python2.7 and numpy 1.8 installed on all nodes of the work cluster</readme>
+    </package>
+</tool_dependency>