Mercurial > repos > pjbriggs > macs21

comparison tool_dependencies.xml @ 0:fdad0c8c0957 draft

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Uploaded initial version to test toolshed.
author pjbriggs
date Wed, 21 Jan 2015 11:07:37 -0500
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children d0986d2be693
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-1:000000000000 0:fdad0c8c0957
1 <?xml version="1.0"?>
2 <tool_dependency>
3 <package name="python" version="2.7">
4 <repository changeset_revision="74d009a2a4cb" name="package_python_2_7" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
5 </package>
6 <package name="numpy" version="1.8.1">
7 <repository changeset_revision="0f9f634dec8a" name="package_numpy_1_8" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
8 </package>
9 <package name="macs2" version="2.1.0.20140616">
10 <install version="1.0">
11 <actions>
12 <action type="download_by_url">https://pypi.python.org/packages/source/M/MACS2/MACS2-2.1.0.20140616.tar.gz</action>
13 <action type="set_environment_for_install">
14 <repository changeset_revision="74d009a2a4cb" name="package_python_2_7" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
15 <package name="python" version="2.7" />
16 </repository>
17 <repository changeset_revision="0f9f634dec8a" name="package_numpy_1_8" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
18 <package name="numpy" version="1.8.1" />
19 </repository>
20 </action>
21 <action type="make_directory">$INSTALL_DIR/lib/python</action>
22 <action type="shell_command">
23 export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp;
24 python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin
25 </action>
26 <action type="set_environment">
27 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable>
28 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
29 </action>
30 </actions>
31 </install>
32 <readme>Macs2.1 depends on having python2.7 and numpy 1.8 installed on all nodes of the work cluster</readme>
33 </package>
34 </tool_dependency>