Mercurial > repos > pjbriggs > macs21

diff tool_dependencies.xml @ 7:0c6b14f3fefc draft

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Attempt to fix installation of tool dependencies for UCSC/bigwig generation, and trap for undefined genome build.
author pjbriggs
date Tue, 21 Apr 2015 08:29:16 -0400
parents 344dd37d1704
children 7aecd0908b3c
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line diff
--- a/tool_dependencies.xml	Tue Apr 21 07:53:37 2015 -0400
+++ b/tool_dependencies.xml	Tue Apr 21 08:29:16 2015 -0400
@@ -32,6 +32,9 @@
               <action type="chmod">
                 <file mode="755">$INSTALL_DIR/bedGraphToBigWig</file>
               </action>
+              <action type="set_environment">
+                <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR</environment_variable>
+              </action>
 	    </actions>
       </install>
   </package>