Mercurial > repos > pjbriggs > macs21

annotate run_planemo_tests.sh @ 23:c7646ff9b5c9 draft default tip

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planemo upload commit a2f39c10087e77bde5b5db5d04305f72b8eb2af2
author pjbriggs
date Tue, 27 Jun 2023 07:37:07 +0000
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c7646ff9b5c9 planemo upload commit a2f39c10087e77bde5b5db5d04305f72b8eb2af2
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1 #!/bin/bash
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2 #
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3 # Install dependencies and set up environment for
c7646ff9b5c9 planemo upload commit a2f39c10087e77bde5b5db5d04305f72b8eb2af2
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4 # the macs21 tool, then run tests using planemo
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5 #
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6 # Note that any arguments supplied to the script are
c7646ff9b5c9 planemo upload commit a2f39c10087e77bde5b5db5d04305f72b8eb2af2
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7 # passed directly to the "planemo test..." invocation
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8 #
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9 # e.g. --install_galaxy (to get planemo to create a
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10 # Galaxy instance to run tests)
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11 #
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12 # --galaxy_root DIR (to run tests using existing
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13 # Galaxy instance)
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14 #
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15 # Run the planemo tests
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16 planemo test $@ $(dirname $0)/macs21_wrapper.xml
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17 ##
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18 #