Mercurial > repos > pjbriggs > macs21
comparison run_planemo_tests.sh @ 23:c7646ff9b5c9 draft default tip
planemo upload commit a2f39c10087e77bde5b5db5d04305f72b8eb2af2
| author | pjbriggs |
|---|---|
| date | Tue, 27 Jun 2023 07:37:07 +0000 |
| parents | |
| children |
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| 22:dfb939015935 | 23:c7646ff9b5c9 |
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| 1 #!/bin/bash | |
| 2 # | |
| 3 # Install dependencies and set up environment for | |
| 4 # the macs21 tool, then run tests using planemo | |
| 5 # | |
| 6 # Note that any arguments supplied to the script are | |
| 7 # passed directly to the "planemo test..." invocation | |
| 8 # | |
| 9 # e.g. --install_galaxy (to get planemo to create a | |
| 10 # Galaxy instance to run tests) | |
| 11 # | |
| 12 # --galaxy_root DIR (to run tests using existing | |
| 13 # Galaxy instance) | |
| 14 # | |
| 15 # Run the planemo tests | |
| 16 planemo test $@ $(dirname $0)/macs21_wrapper.xml | |
| 17 ## | |
| 18 # |