Mercurial > repos > pimarin > data_manager_fetch_plasmidfinder

diff data_manager/plasmidfinder_fetch_database.xml @ 2:bd56ac4cca16 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit 704e7cba33e85648198babefb4d82df66c6709f8
author pimarin
date Fri, 17 Feb 2023 08:04:44 +0000
parents 9ef108e34063
children 5ffc68b4ec04
line wrap: on
line diff
--- a/data_manager/plasmidfinder_fetch_database.xml	Wed Feb 15 10:35:15 2023 +0000
+++ b/data_manager/plasmidfinder_fetch_database.xml	Fri Feb 17 08:04:44 2023 +0000
@@ -26,7 +26,7 @@
             <param name="database_select" value="latest"/>
             <output name="output_file" value="plasmidfinder_test_data_manager_latest.json">
                 <assert_contents>
-                    <has_text_matching expression='\{"data_tables":\ \{\"plasmidfinder_database\"\:\ \[\{\"date\"\:\ \"\d\d\d\d\w\d\d\w\d\d\", \"name\"\: \"\w\w\w\w\w\w\w\w\w\w\w\w\d\d\d\d-\d\d-\d\d\",\ \"path\"\:\ \"plasmidfinder-db\",\ \"value\"\:\ \"plasmidfinder_\w\w\w\w\w\w\w\w\w\w\w_\d\d\d\d-\d\d-\d\d\"' />
+                    <has_text_matching expression="\{&quot;data_tables&quot;\:\ {&quot;plasmidfinder_database&quot;:\ \[\{&quot;date&quot;:\ &quot;\d\d\d\d-\d\d-\d\d&quot;,\ &quot;name&quot;:\ &quot;c18e08c17a59_\d\d\d\d-\d\d-\d\d&quot;,\ &quot;path&quot;:\ &quot;plasmidfinder_database&quot;,\ &quot;value&quot;:\ &quot;plasmidfinder_c18e08c17a59_2023-02-15&quot;\}\]\}\}"/>
                 </assert_contents>
             </output>
         </test>
@@ -35,7 +35,7 @@
             <param name="database_select" value="2.1"/>
             <output name="output_file" value="plasmidfinder_test_data_manager_2.1.json">
                 <assert_contents>
-                    <has_text_matching expression='"data_tables": \{"plasmidfinder_database": \[\{"date": "\d\d\d\\d-\d\d-\d\d", "name": "2\.1_\d\d\d\d-\d\d-\d\d", "path": "plasmidfinder-db", "value": "plasmidfinder_\w\w\w\w\w\w\w\w\w\w\w\w_\d\d\d\d-\d\d-\d\d"' />
+                    <has_text_matching expression="\{&quot;data_tables&quot;\:\ {&quot;plasmidfinder_database&quot;:\ \[\{&quot;date&quot;:\ &quot;\d\d\d\d-\d\d-\d\d&quot;,\ &quot;name&quot;:\ &quot;2.1_\d\d\d\d-\d\d-\d\d&quot;,\ &quot;path&quot;:\ &quot;plasmidfinder_database&quot;,\ &quot;value&quot;:\ &quot;plasmidfinder_1307168b1ce7_2023-02-15&quot;\}\]\}\}"/>
                 </assert_contents>
             </output>
         </test>