Mercurial > repos > pimarin > data_manager_fetch_plasmidfinder

comparison data_manager/plasmidfinder_fetch_database.xml @ 2:bd56ac4cca16 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit 704e7cba33e85648198babefb4d82df66c6709f8
author pimarin
date Fri, 17 Feb 2023 08:04:44 +0000
parents 9ef108e34063
children 5ffc68b4ec04
comparison
equal deleted inserted replaced
1:9ef108e34063 2:bd56ac4cca16
24 <!-- Test_1 DB latest --> 24 <!-- Test_1 DB latest -->
25 <test expect_num_outputs="1"> 25 <test expect_num_outputs="1">
26 <param name="database_select" value="latest"/> 26 <param name="database_select" value="latest"/>
27 <output name="output_file" value="plasmidfinder_test_data_manager_latest.json"> 27 <output name="output_file" value="plasmidfinder_test_data_manager_latest.json">
28 <assert_contents> 28 <assert_contents>
29 <has_text_matching expression='\{"data_tables":\ \{\"plasmidfinder_database\"\:\ \[\{\"date\"\:\ \"\d\d\d\d\w\d\d\w\d\d\", \"name\"\: \"\w\w\w\w\w\w\w\w\w\w\w\w\d\d\d\d-\d\d-\d\d\",\ \"path\"\:\ \"plasmidfinder-db\",\ \"value\"\:\ \"plasmidfinder_\w\w\w\w\w\w\w\w\w\w\w_\d\d\d\d-\d\d-\d\d\"' /> 29 <has_text_matching expression="\{&quot;data_tables&quot;\:\ {&quot;plasmidfinder_database&quot;:\ \[\{&quot;date&quot;:\ &quot;\d\d\d\d-\d\d-\d\d&quot;,\ &quot;name&quot;:\ &quot;c18e08c17a59_\d\d\d\d-\d\d-\d\d&quot;,\ &quot;path&quot;:\ &quot;plasmidfinder_database&quot;,\ &quot;value&quot;:\ &quot;plasmidfinder_c18e08c17a59_2023-02-15&quot;\}\]\}\}"/>
30 </assert_contents> 30 </assert_contents>
31 </output> 31 </output>
32 </test> 32 </test>
33 <!-- Test_2 DB 2.1 --> 33 <!-- Test_2 DB 2.1 -->
34 <test expect_num_outputs="1"> 34 <test expect_num_outputs="1">
35 <param name="database_select" value="2.1"/> 35 <param name="database_select" value="2.1"/>
36 <output name="output_file" value="plasmidfinder_test_data_manager_2.1.json"> 36 <output name="output_file" value="plasmidfinder_test_data_manager_2.1.json">
37 <assert_contents> 37 <assert_contents>
38 <has_text_matching expression='"data_tables": \{"plasmidfinder_database": \[\{"date": "\d\d\d\\d-\d\d-\d\d", "name": "2\.1_\d\d\d\d-\d\d-\d\d", "path": "plasmidfinder-db", "value": "plasmidfinder_\w\w\w\w\w\w\w\w\w\w\w\w_\d\d\d\d-\d\d-\d\d"' /> 38 <has_text_matching expression="\{&quot;data_tables&quot;\:\ {&quot;plasmidfinder_database&quot;:\ \[\{&quot;date&quot;:\ &quot;\d\d\d\d-\d\d-\d\d&quot;,\ &quot;name&quot;:\ &quot;2.1_\d\d\d\d-\d\d-\d\d&quot;,\ &quot;path&quot;:\ &quot;plasmidfinder_database&quot;,\ &quot;value&quot;:\ &quot;plasmidfinder_1307168b1ce7_2023-02-15&quot;\}\]\}\}"/>
39 </assert_contents> 39 </assert_contents>
40 </output> 40 </output>
41 </test> 41 </test>
42 </tests> 42 </tests>
43 <help><![CDATA[ 43 <help><![CDATA[