Mercurial > repos > pimarin > data_manager_amrfinderplus

annotate data_manager_conf.xml @ 0:8e1bbef44e19 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_amrfinderplus commit a7bd2bf9c3e46c3524ee640bb60c8062b3257217-dirty
author pimarin
date Thu, 10 Nov 2022 15:10:15 +0000
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children f1ec3a39ffec
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0
8e1bbef44e19 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_amrfinderplus commit a7bd2bf9c3e46c3524ee640bb60c8062b3257217-dirty
pimarin
parents:
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1 <?xml version="1.0"?>
8e1bbef44e19 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_amrfinderplus commit a7bd2bf9c3e46c3524ee640bb60c8062b3257217-dirty
pimarin
parents:
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2 <data_managers>
8e1bbef44e19 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_amrfinderplus commit a7bd2bf9c3e46c3524ee640bb60c8062b3257217-dirty
pimarin
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3 <data_manager tool_file="data_manager/data_manager_amrfinderplus.xml" id="data_manager_amrfinderplus" version="@TOOL_VERSION@">
8e1bbef44e19 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_amrfinderplus commit a7bd2bf9c3e46c3524ee640bb60c8062b3257217-dirty
pimarin
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4 <data_table name="amrfinderplus_database">
8e1bbef44e19 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_amrfinderplus commit a7bd2bf9c3e46c3524ee640bb60c8062b3257217-dirty
pimarin
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5 <output>
8e1bbef44e19 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_amrfinderplus commit a7bd2bf9c3e46c3524ee640bb60c8062b3257217-dirty
pimarin
parents:
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6 <column name="value" />
8e1bbef44e19 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_amrfinderplus commit a7bd2bf9c3e46c3524ee640bb60c8062b3257217-dirty
pimarin
parents:
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7 <column name="name" />
8e1bbef44e19 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_amrfinderplus commit a7bd2bf9c3e46c3524ee640bb60c8062b3257217-dirty
pimarin
parents:
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8 <column name="path" output_ref="out_file">
8e1bbef44e19 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_amrfinderplus commit a7bd2bf9c3e46c3524ee640bb60c8062b3257217-dirty
pimarin
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9 <move type="directory" relativize_symlinks="True">
8e1bbef44e19 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_amrfinderplus commit a7bd2bf9c3e46c3524ee640bb60c8062b3257217-dirty
pimarin
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10 <source>${path}</source>
8e1bbef44e19 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_amrfinderplus commit a7bd2bf9c3e46c3524ee640bb60c8062b3257217-dirty
pimarin
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11 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">amrfinderplus/${value}</target>
8e1bbef44e19 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_amrfinderplus commit a7bd2bf9c3e46c3524ee640bb60c8062b3257217-dirty
pimarin
parents:
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12 </move>
8e1bbef44e19 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_amrfinderplus commit a7bd2bf9c3e46c3524ee640bb60c8062b3257217-dirty
pimarin
parents:
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13 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/amrfinderplus/${value}</value_translation>
8e1bbef44e19 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_amrfinderplus commit a7bd2bf9c3e46c3524ee640bb60c8062b3257217-dirty
pimarin
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14 <value_translation type="function">abspath</value_translation>
8e1bbef44e19 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_amrfinderplus commit a7bd2bf9c3e46c3524ee640bb60c8062b3257217-dirty
pimarin
parents:
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15 </column>
8e1bbef44e19 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_amrfinderplus commit a7bd2bf9c3e46c3524ee640bb60c8062b3257217-dirty
pimarin
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16 </output>
8e1bbef44e19 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_amrfinderplus commit a7bd2bf9c3e46c3524ee640bb60c8062b3257217-dirty
pimarin
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17 </data_table>
8e1bbef44e19 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_amrfinderplus commit a7bd2bf9c3e46c3524ee640bb60c8062b3257217-dirty
pimarin
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18 </data_manager>
8e1bbef44e19 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_amrfinderplus commit a7bd2bf9c3e46c3524ee640bb60c8062b3257217-dirty
pimarin
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19 </data_managers>