Mercurial > repos > pimarin > bedtools
diff tool-data/dbkeys.loc.sample @ 0:4cacc5b8001b draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools
| author | pimarin |
|---|---|
| date | Thu, 23 Feb 2023 09:50:24 +0000 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool-data/dbkeys.loc.sample Thu Feb 23 09:50:24 2023 +0000 @@ -0,0 +1,13 @@ +#This file lists the locations and dbkeys of all the genome files +#See here for details: http://bedtools.readthedocs.io/en/latest/content/general-usage.html#genome-file-format +#You can add elements to this data table using the data_manager_fetch_genome_dbkeys_all_fasta data manager. +#Alternatively, index files created using samtools faidx (http://www.htslib.org/doc/faidx.html) contain 3 extra columns, but work fine. +#This file has the format (white space characters are TAB characters): +# +#<dbkey> <display_name> <file_path> +# +#So, dbkeys.loc could look something like this: +# +#apiMel3 Honeybee (Apis mellifera): apiMel3 /path/to/genome/apiMel3/apiMel3.len +#hg19 Human (Homo sapiens): hg19 Canonical /path/to/genome/hg19/hg19canon.len +#