comparison tool-data/dbkeys.loc.sample @ 0:4cacc5b8001b draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools
author pimarin
date Thu, 23 Feb 2023 09:50:24 +0000
parents
children
comparison
equal deleted inserted replaced
-1:000000000000 0:4cacc5b8001b
1 #This file lists the locations and dbkeys of all the genome files
2 #See here for details: http://bedtools.readthedocs.io/en/latest/content/general-usage.html#genome-file-format
3 #You can add elements to this data table using the data_manager_fetch_genome_dbkeys_all_fasta data manager.
4 #Alternatively, index files created using samtools faidx (http://www.htslib.org/doc/faidx.html) contain 3 extra columns, but work fine.
5 #This file has the format (white space characters are TAB characters):
6 #
7 #<dbkey> <display_name> <file_path>
8 #
9 #So, dbkeys.loc could look something like this:
10 #
11 #apiMel3 Honeybee (Apis mellifera): apiMel3 /path/to/genome/apiMel3/apiMel3.len
12 #hg19 Human (Homo sapiens): hg19 Canonical /path/to/genome/hg19/hg19canon.len
13 #