Mercurial > repos > pimarin > bedtools
diff tool-data/all_gff.loc.sample @ 0:4cacc5b8001b draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools
| author | pimarin |
|---|---|
| date | Thu, 23 Feb 2023 09:50:24 +0000 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool-data/all_gff.loc.sample Thu Feb 23 09:50:24 2023 +0000 @@ -0,0 +1,14 @@ +#This file lists the locations and dbkeys of all the GFF files +#This file has the format (white space characters are +#TAB characters): +# +#<unique_build_id> <dbkey> <display_name> <file_path> +# +#So, all_gff.loc could look something like this: +# +#apiMel3 apiMel3 Honeybee (Apis mellifera): apiMel3 /path/to/annotation/apiMel3/apiMel3.gff +#hg19canon hg19 Human (Homo sapiens): hg19 Canonical /path/to/annotation/hg19/hg19canon.gff +#hg19full hg19 Human (Homo sapiens): hg19 Representative transcripts /path/to/annotation/hg19/hg19_representative_tx.gff +# +#Your all_gff.loc file should contain an entry for each different annotation. +#So there can be multiple gff files for each build, such as with hg19 above.